DMR 36832 chr1:110752301-110752450 (150bp)

DMR Stats
Positionchr1:110752301-110752450 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesKCNC4 (885bp away)
ANODEV p-value0.00598023973016
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36832 chr1 110752306 110752975 wgEncodeRegDnaseClusteredV2 120 score:1000, srow:61659
36832 chr1 110751775 110752450 wgEncodeRegTfbsClusteredV3 KAP1 score:351, expCount:1, expNums:365, expScores:351, srow:215674
36832 chr1 110752214 110752883 wgEncodeRegTfbsClusteredV3 RBBP5 score:190, expCount:1, expNums:8, expScores:190, srow:215675
36832 chr1 110752248 110752843 wgEncodeRegTfbsClusteredV3 ZNF263 score:386, expCount:1, expNums:368, expScores:386, srow:215676
36832 chr1 110752257 110752600 wgEncodeRegTfbsClusteredV3 NR2C2 score:95, expCount:1, expNums:454, expScores:95, srow:215677
36832 chr1 110752343 110752722 wgEncodeRegTfbsClusteredV3 CHD2 score:278, expCount:2, expNums:288,345, expScores:153,278, srow:215678
36832 chr1 110752429 110752828 wgEncodeRegTfbsClusteredV3 NR2F2 score:441, expCount:1, expNums:225, expScores:441, srow:215679
36832 chr1 110752429 110752437 phastConsElements100way lod=13 score:247, srow:457046
36832 chr1 110752442 110752456 phastConsElements100way lod=19 score:285, srow:457047
36832 chr1 110752257 110754794 cpgIsland CpG: 262 length:2538, cpgNum:262, gcNum:1693, perCpg:20.6, perGc:66.7, obsExp:0.93, srow:1417
  • 10 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36832 cellmeth_recounts PrEC: 3, LNCaP: 178, DU145: 8
36832 cellmeth_diffreps_PrECvsLNCaP A=5, B=266, Length=820, Event=Up, log2FC=5.73, padj=0
36832 cellmeth_diffreps_LNCaPvsDU145 A=284.37, B=7.48, Length=820, Event=Down, log2FC=-5.25, padj=0
36832 cellexp id=ENSG00000224965, name=KCNC4-AS1, PrEC=2, str=2, LNCaP=0, str=0, DU145=3, str=1
36832 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305