DMR 36840 chr1:113421001-113421150 (150bp)

DMR Stats
Positionchr1:113421001-113421150 (View on UCSC)
Width150bp
Genomic Context3' end
Nearest GenesHP08777 (509bp away)
ANODEV p-value0.00595542437893
FrequenciesBenign: 1.0 (14.29%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36840 chr1 113420961 113421195 wgEncodeRegDnaseClusteredV2 6 score:392, srow:63360
36840 chr1 113420849 113421300 wgEncodeRegTfbsClusteredV3 MYC score:268, expCount:2, expNums:487,489, expScores:231,268, srow:221593
36840 chr1 113420849 113421284 wgEncodeRegTfbsClusteredV3 UBTF score:154, expCount:1, expNums:549, expScores:154, srow:221594
36840 chr1 113420855 113421258 wgEncodeRegTfbsClusteredV3 ZBTB7A score:308, expCount:1, expNums:247, expScores:308, srow:221595
36840 chr1 113420879 113421254 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:12, expNums:12,24,174,213,493,597,604,621,648,661,667,679, expScores:127,967,296,742,1000,112,234,1000,144,170,169,580, srow:221596
36840 chr1 113420879 113421248 wgEncodeRegTfbsClusteredV3 MAZ score:415, expCount:1, expNums:512, expScores:415, srow:221597
36840 chr1 113420886 113421341 wgEncodeRegTfbsClusteredV3 JUND score:684, expCount:2, expNums:507,594, expScores:684,462, srow:221598
36840 chr1 113420888 113421203 wgEncodeRegTfbsClusteredV3 EP300 score:180, expCount:1, expNums:519, expScores:180, srow:221599
36840 chr1 113420897 113421336 wgEncodeRegTfbsClusteredV3 CBX3 score:279, expCount:1, expNums:211, expScores:279, srow:221600
36840 chr1 113420900 113421209 wgEncodeRegTfbsClusteredV3 BHLHE40 score:217, expCount:1, expNums:472, expScores:217, srow:221601
36840 chr1 113420918 113421350 wgEncodeRegTfbsClusteredV3 MAX score:230, expCount:2, expNums:223,511, expScores:230,170, srow:221602
36840 chr1 113420921 113421210 wgEncodeRegTfbsClusteredV3 ZNF143 score:224, expCount:1, expNums:552, expScores:224, srow:221603
36840 chr1 113420924 113421201 wgEncodeRegTfbsClusteredV3 RAD21 score:831, expCount:4, expNums:193,231,448,529, expScores:551,831,203,138, srow:221604
36840 chr1 113420934 113421203 wgEncodeRegTfbsClusteredV3 SMC3 score:280, expCount:1, expNums:535, expScores:280, srow:221605
36840 chr1 113420938 113421233 wgEncodeRegTfbsClusteredV3 RCOR1 score:407, expCount:1, expNums:492, expScores:407, srow:221606
36840 chr1 113420940 113421563 wgEncodeRegTfbsClusteredV3 PHF8 score:364, expCount:1, expNums:30, expScores:364, srow:221607
36840 chr1 113420967 113421222 wgEncodeRegTfbsClusteredV3 ATF1 score:155, expCount:1, expNums:468, expScores:155, srow:221608
36840 chr1 113420977 113421146 wgEncodeRegTfbsClusteredV3 CTCFL score:126, expCount:1, expNums:214, expScores:126, srow:221609
36840 chr1 113420994 113421223 wgEncodeRegTfbsClusteredV3 JUN score:228, expCount:1, expNums:484, expScores:228, srow:221610
  • 19 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36840 cellmeth_recounts PrEC: 13, LNCaP: 0, DU145: 1
36840 cellmeth_diffreps_PrECvsLNCaP A=22, B=0, Length=400, Event=Down, log2FC=-Inf, padj=2.04501321634913e-06
36840 cellmeth_diffreps_PrECvsDU145 A=22, B=1, Length=360, Event=Down, log2FC=-4.46, padj=7.31546672071902e-05
36840 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305