DMR 36872 chr1:155931701-155931850 (150bp)

DMR Stats
Positionchr1:155931701-155931850 (View on UCSC)
Width150bp
Genomic Context3' end
Nearest GenesARHGEF2 (0bp away)
ANODEV p-value0.000944776208772
FrequenciesBenign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36872 ARHGEF2 1846 uc001fmr.2 chr1 155916630 155947966 - 150 100.0 0.1 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0) 0.0
36872 ARHGEF2 1846 uc001fms.2 chr1 155916630 155948336 - 150 100.0 0.08 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0) 0.0
36872 ARHGEF2 1846 uc001fmt.2 chr1 155916630 155948336 - 150 100.0 0.18 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0) 0.0
36872 ARHGEF2 1846 uc001fmu.2 chr1 155916630 155959864 - 150 100.0 0.1 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (100), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (0), E26 (0) 0.0
36872 ARHGEF2 1846 uc010pgt.1 chr1 155931452 155949081 - 150 100.0 0.36 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0) 100.0
36872 ARHGEF2 1846 uc010pgu.1 chr1 155931452 155959290 - 150 100.0 0.13 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (100), E14 (0) 100.0
  • 6 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36872 chr1 155931786 155932095 wgEncodeRegDnaseClusteredV2 109 score:1000, srow:73325
36872 chr1 155931440 155932138 wgEncodeRegTfbsClusteredV3 POLR2A score:443, expCount:9, expNums:62,105,163,168,206,275,563,599,613, expScores:274,443,303,341,325,249,383,136,169, srow:265196
36872 chr1 155931577 155932236 wgEncodeRegTfbsClusteredV3 SMARCB1 score:238, expCount:1, expNums:391, expScores:238, srow:265197
36872 chr1 155931612 155932261 wgEncodeRegTfbsClusteredV3 SMARCC1 score:274, expCount:1, expNums:371, expScores:274, srow:265198
36872 chr1 155931668 155931971 wgEncodeRegTfbsClusteredV3 ESR1 score:153, expCount:1, expNums:74, expScores:153, srow:265199
36872 chr1 155931714 155931977 wgEncodeRegTfbsClusteredV3 CEBPB score:222, expCount:1, expNums:378, expScores:222, srow:265200
36872 chr1 155931719 155932174 wgEncodeRegTfbsClusteredV3 GTF2F1 score:142, expCount:1, expNums:389, expScores:142, srow:265201
36872 chr1 155931720 155932223 wgEncodeRegTfbsClusteredV3 TCF7L2 score:365, expCount:2, expNums:363,414, expScores:365,281, srow:265202
36872 chr1 155931730 155932137 wgEncodeRegTfbsClusteredV3 MAX score:274, expCount:3, expNums:278,395,460, expScores:239,274,160, srow:265203
36872 chr1 155931738 155932113 wgEncodeRegTfbsClusteredV3 ZKSCAN1 score:224, expCount:1, expNums:418, expScores:224, srow:265204
36872 chr1 155931747 155932130 wgEncodeRegTfbsClusteredV3 RCOR1 score:323, expCount:1, expNums:383, expScores:323, srow:265205
36872 chr1 155931748 155932103 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:197, expCount:1, expNums:260, expScores:197, srow:265206
36872 chr1 155931748 155932211 wgEncodeRegTfbsClusteredV3 MAZ score:177, expCount:1, expNums:396, expScores:177, srow:265207
36872 chr1 155931750 155932157 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:81, expNums:0,2,5,9,14,16,18,20,35,37,39,42,44,48,49,174,262,290,463,493,595,597,598,601,603,604,605,606,607,609,612,618,621,627,628,629,630,631,635,636,638,639,640,641,642,643,644,646,648,650,651,653,655,657,658,659,660,661,662,664,665,666,667,668,669,671,672,673,674,675,676,677,678,680,682,684,685,686,687,688,689, expScores:127,120,150,822,75,562,327,416,214,697,187,208,629,354,344,130,292,148,813,175,1000,880,1000,310,242,1000,240,489,319,191,1000,339,143,661,1000,888,821,770,1000,911,339,984,336,407,919,458,221,427,411,683,373,561,127,581,511,731,108,662,945,305,410,422,130,176,390,462,214,874,372,359,414,566,541,173,129,137,643,311,193,168,342, srow:265208
36872 chr1 155931753 155932122 wgEncodeRegTfbsClusteredV3 CHD2 score:271, expCount:1, expNums:380, expScores:271, srow:265209
36872 chr1 155931759 155932142 wgEncodeRegTfbsClusteredV3 USF1 score:256, expCount:4, expNums:67,68,69,265, expScores:165,256,212,161, srow:265210
36872 chr1 155931760 155932029 wgEncodeRegTfbsClusteredV3 YY1 score:142, expCount:1, expNums:164, expScores:142, srow:265211
36872 chr1 155931761 155932110 wgEncodeRegTfbsClusteredV3 ELK1 score:146, expCount:1, expNums:387, expScores:146, srow:265212
36872 chr1 155931763 155932094 wgEncodeRegTfbsClusteredV3 MYC score:257, expCount:3, expNums:560,561,624, expScores:257,257,230, srow:265213
36872 chr1 155931774 155932093 wgEncodeRegTfbsClusteredV3 JUND score:452, expCount:1, expNums:393, expScores:452, srow:265214
36872 chr1 155931778 155932117 wgEncodeRegTfbsClusteredV3 JUN score:436, expCount:2, expNums:381,458, expScores:237,436, srow:265215
36872 chr1 155931782 155932085 wgEncodeRegTfbsClusteredV3 FOXP2 score:240, expCount:1, expNums:251, expScores:240, srow:265216
36872 chr1 155931788 155932087 wgEncodeRegTfbsClusteredV3 NR3C1 score:164, expCount:2, expNums:56,77, expScores:164,162, srow:265217
36872 chr1 155931789 155932052 wgEncodeRegTfbsClusteredV3 GABPA score:151, expCount:1, expNums:166, expScores:151, srow:265218
36872 chr1 155931799 155932102 wgEncodeRegTfbsClusteredV3 FOS score:1000, expCount:6, expNums:457,556,557,558,559,590, expScores:907,739,850,677,1000,143, srow:265219
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  • 25 of 35 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36872 cellmeth_recounts PrEC: 0, LNCaP: 3, DU145: 0
36872 cellexp id=ENSG00000116584, name=ARHGEF2, PrEC=4903, str=4662, LNCaP=3135, str=610, DU145=8638, str=7522
36872 tcgameth site:cg13921921, B=0.47, L=0.64, H=0.56
36872 tcgaexp gene=ARHGEF2, entrez=9181, pos=chr1:155916630-155959864(-), B=1901, L=1256, M=1196, H=1373
36872 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305
36872 pubmed gene=ARHGEF2, G=78, GP=2, GC=23, GM=0, GPM=0, GCM=0