DMR 36893 chr1:166853251-166853500 (250bp)
| DMR Stats | |
|---|---|
| Position | chr1:166853251-166853500 (View on UCSC) |
| Width | 250bp |
| Genomic Context | intergenic |
| Nearest Genes | TADA1 (7596bp away) |
| ANODEV p-value | 1.48355883946e-05 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 36893 | chr1 | 166853426 | 166853835 | wgEncodeRegDnaseClusteredV2 | 62 | score:884, srow:79251 |
| 36893 | chr1 | 166853195 | 166854361 | wgEncodeRegTfbsClusteredV3 | EZH2 | score:280, expCount:2, expNums:36,43, expScores:280,265, srow:289385 |
| 36893 | chr1 | 166853232 | 166853901 | wgEncodeRegTfbsClusteredV3 | RBBP5 | score:213, expCount:1, expNums:8, expScores:213, srow:289386 |
| 36893 | chr1 | 166853486 | 166853861 | wgEncodeRegTfbsClusteredV3 | TBP | score:243, expCount:1, expNums:359, expScores:243, srow:289387 |
| 36893 | chr1 | 166853254 | 166853790 | cpgIsland | CpG: 44 | length:537, cpgNum:44, gcNum:350, perCpg:16.4, perGc:65.2, obsExp:0.77, srow:1895 |
| 36893 | chr1 | 166851254 | 166853253 | cpgShore | — | values(x.gr)[overs$srow, ]:3479 |
- 6 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 36893 | cellmeth_recounts | PrEC: 13, LNCaP: 6, DU145: 8 |  |
| 36893 | cellmeth_diffreps_PrECvsDU145 | A=18, B=1, Length=300, Event=Down, log2FC=-4.17, padj=0.000790397688779211 |  |
| 36893 | tcgameth | site:cg03433241, B=0.6, L=0.56, H=0.57 |  |
| 36893 | tcgameth | site:cg11849738, B=0.31, L=0.4, H=0.42 |  |
| 36893 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |