DMR 36937 chr1:202137351-202137500 (150bp)

DMR Stats
Positionchr1:202137351-202137500 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesPTPRVP (0bp away)
ANODEV p-value0.0087880608953
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
36937 PTPRVP 2381 uc010ppz.1 chr1 202137179 202158577 + 150 100.0 0.23 1 100.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
36937 chr1 202137146 202137510 wgEncodeRegDnaseClusteredV2 30 score:733, srow:93999
36937 chr1 202137198 202137607 wgEncodeRegTfbsClusteredV3 GATA2 score:232, expCount:1, expNums:586, expScores:232, srow:344052
36937 chr1 202137221 202137524 wgEncodeRegTfbsClusteredV3 FOXP2 score:167, expCount:1, expNums:251, expScores:167, srow:344053
36937 chr1 202137258 202137573 wgEncodeRegTfbsClusteredV3 EP300 score:384, expCount:1, expNums:263, expScores:384, srow:344054
36937 chr1 202137282 202137551 wgEncodeRegTfbsClusteredV3 REST score:263, expCount:1, expNums:257, expScores:263, srow:344055
36937 chr1 202137295 202137456 wgEncodeRegTfbsClusteredV3 USF1 score:944, expCount:1, expNums:265, expScores:944, srow:344056
  • 6 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
36937 cellmeth_recounts PrEC: 5, LNCaP: 1, DU145: 10
36937 cellexp id=ENSG00000243323, name=PTPRVP, PrEC=1, str=2, LNCaP=25, str=10, DU145=21, str=2
36937 tcgaexp gene=PTPRVP, entrez=148713, pos=chr1:202137179-202158577(+), B=2, L=2, M=3, H=4