DMR 37000 chr1:226789951-226790150 (200bp)
| DMR Stats | |
|---|---|
| Position | chr1:226789951-226790150 (View on UCSC) |
| Width | 200bp |
| Genomic Context | exon |
| Nearest Genes | C1orf95 (0bp away) |
| ANODEV p-value | 0.000435960162013 |
| Frequencies | Benign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37000 | C1orf95 | 2640 | uc021pjw.1 | chr1 | 226736501 | 226796915 | + | 200 | 100.0 | 0.08 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 0.0 |
| 37000 | C1orf95 | 2640 | uc021pjx.1 | chr1 | 226736501 | 226796915 | + | 200 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (100) | 0.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 37000 | chr1 | 226789966 | 226790175 | wgEncodeRegDnaseClusteredV2 | 4 | score:308, srow:108040 |
| 37000 | chr1 | 226790122 | 226790145 | tfbsConsSites | V$BRACH_01 | score:692, zScore:1.94, srow:473187 |
- 2 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37000 | cellmeth_recounts | PrEC: 5, LNCaP: 0, DU145: 0 |  |
| 37000 | cellexp | id=ENSG00000203685, name=C1orf95, PrEC=0, str=0, LNCaP=253, str=195, DU145=1, str=1 |  |
| 37000 | tcgaexp | gene=C1orf95, entrez=375057, pos=chr1:226736501-226796915(+), B=450, L=224, M=220, H=159 |  |
| 37000 | pubmed | gene=C1orf95, G=0, GP=0, GC=0, GM=0, GPM=0, GCM=0 |  |