DMR 37042 chr1:236228551-236228750 (200bp)

DMR Stats
Positionchr1:236228551-236228750 (View on UCSC)
Width200bp
Genomic Contextpromoter
Nearest GenesAX747246 (0bp away)
ANODEV p-value5.31421841086e-05
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
37042 AX747246 2746 uc001hxp.1 chr1 236227660 236229779 + 200 100.0 0.42 0 0.0 E1 (100) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37042 chr1 236227126 236228695 wgEncodeRegDnaseClusteredV2 114 score:1000, srow:114583
37042 chr1 236228746 236229390 wgEncodeRegDnaseClusteredV2 27 score:753, srow:114584
37042 chr1 236227921 236228650 wgEncodeRegTfbsClusteredV3 ZNF263 score:1000, expCount:1, expNums:368, expScores:247, srow:422323
37042 chr1 236227990 236228932 wgEncodeRegTfbsClusteredV3 EZH2 score:288, expCount:1, expNums:40, expScores:257, srow:422324
37042 chr1 236228148 236228968 wgEncodeRegTfbsClusteredV3 POLR2A score:815, expCount:13, expNums:61,62,191,192,259,336,340,366,445,446,599,602,637, expScores:380,255,619,815,249,265,229,200,116,427,421,150,145, srow:422327
37042 chr1 236228174 236228708 wgEncodeRegTfbsClusteredV3 TAF1 score:615, expCount:4, expNums:157,199,254,261, expScores:207,349,157,164, srow:422328
37042 chr1 236228203 236228578 wgEncodeRegTfbsClusteredV3 TBP score:304, expCount:2, expNums:359,452, expScores:266,304, srow:422329
37042 chr1 236228250 236228849 wgEncodeRegTfbsClusteredV3 CTBP2 score:136, expCount:1, expNums:348, expScores:136, srow:422330
37042 chr1 236228276 236228752 wgEncodeRegTfbsClusteredV3 MAZ score:334, expCount:2, expNums:297,440, expScores:261,334, srow:422331
37042 chr1 236228277 236228632 wgEncodeRegTfbsClusteredV3 TAF7 score:196, expCount:1, expNums:158, expScores:196, srow:422332
37042 chr1 236228328 236228863 wgEncodeRegTfbsClusteredV3 YY1 score:476, expCount:7, expNums:70,119,128,133,162,203,266, expScores:196,454,308,224,476,389,339, srow:422333
37042 chr1 236228344 236228619 wgEncodeRegTfbsClusteredV3 CEBPD score:157, expCount:1, expNums:173, expScores:157, srow:422334
37042 chr1 236228346 236228685 wgEncodeRegTfbsClusteredV3 HDAC2 score:185, expCount:1, expNums:181, expScores:185, srow:422335
37042 chr1 236228369 236228818 wgEncodeRegTfbsClusteredV3 CTCF score:438, expCount:49, expNums:5,20,42,290,463,595,597,598,603,604,605,606,609,635,636,638,639,640,642,643,644,646,647,651,653,654,655,656,657,658,659,660,661,662,665,667,668,669,671,674,676,677,678,682,684,685,687,688,689, expScores:138,118,188,252,365,234,209,427,214,169,246,224,121,198,115,161,312,180,225,234,103,220,135,143,249,255,98,156,208,148,192,99,329,270,371,222,102,206,187,155,186,438,308,376,191,140,288,328,161, srow:422336
37042 chr1 236228404 236228707 wgEncodeRegTfbsClusteredV3 FOXP2 score:172, expCount:1, expNums:251, expScores:172, srow:422337
37042 chr1 236228410 236228629 wgEncodeRegTfbsClusteredV3 ZBTB7A score:207, expCount:1, expNums:205, expScores:207, srow:422338
37042 chr1 236228427 236228686 wgEncodeRegTfbsClusteredV3 HNF4A score:159, expCount:1, expNums:182, expScores:159, srow:422339
37042 chr1 236228427 236228716 wgEncodeRegTfbsClusteredV3 HNF4G score:156, expCount:1, expNums:183, expScores:156, srow:422340
37042 chr1 236228479 236228702 wgEncodeRegTfbsClusteredV3 RAD21 score:223, expCount:1, expNums:193, expScores:223, srow:422341
37042 chr1 236228552 236228555 phastConsElements100way lod=15 score:262, srow:832514
37042 chr1 236228568 236228576 phastConsElements100way lod=29 score:327, srow:832515
37042 chr1 236228584 236228590 phastConsElements100way lod=17 score:274, srow:832516
37042 chr1 236228594 236228597 phastConsElements100way lod=13 score:247, srow:832517
37042 chr1 236227683 236228817 cpgIsland CpG: 123 length:1135, cpgNum:123, gcNum:779, perCpg:21.7, perGc:68.6, obsExp:0.92, srow:2374
  • 24 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37042 cellmeth_recounts PrEC: 0, LNCaP: 120, DU145: 6
37042 cellmeth_diffreps_PrECvsLNCaP A=0, B=334, Length=1980, Event=Up, log2FC=Inf, padj=0
37042 cellmeth_diffreps_LNCaPvsDU145 A=354.92, B=11.22, Length=1840, Event=Down, log2FC=-4.98, padj=0
37042 tcgameth site:cg00095594, B=0.04, L=0.11, H=0.19
37042 tcgameth site:cg04837025, B=0.06, L=0.33, H=0.34
37042 tcgameth site:cg07157830, B=0.07, L=0.29, H=0.32
37042 pubmed gene=NID1, G=22, GP=0, GC=7, GM=1, GPM=0, GCM=1