DMR 37060 chr1:245131851-245132000 (150bp)

DMR Stats
Positionchr1:245131851-245132000 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesEFCAB2 (1170bp away)
ANODEV p-value0.00413875463558
FrequenciesBenign: 1.0 (14.29%), Low: 1.0 (16.67%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37060 chr1 245131826 245132230 wgEncodeRegDnaseClusteredV2 26 score:428, srow:117994
37060 chr1 245131729 245132218 wgEncodeRegTfbsClusteredV3 TAF1 score:141, expCount:1, expNums:157, expScores:141, srow:432301
37060 chr1 245131811 245132320 wgEncodeRegTfbsClusteredV3 POLR2A score:199, expCount:2, expNums:461,564, expScores:138,199, srow:432302
37060 chr1 245131029 245133028 cpgShore — values(x.gr)[overs$srow, ]:4470
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37060 cellmeth_recounts PrEC: 6, LNCaP: 14, DU145: 28
37060 cellmeth_diffreps_PrECvsDU145 A=0, B=11, Length=240, Event=Up, log2FC=Inf, padj=0.00313959514768542