DMR 37122 chr2:23747251-23747450 (200bp)

DMR Stats
Positionchr2:23747251-23747450 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesKLHL29 (0bp away)
ANODEV p-value0.000958437986209
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
37122 KLHL29 16079 uc010ykg.2 chr2 23608298 23931483 + 200 100.0 0.17 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37122 chr2 23747166 23747875 wgEncodeRegDnaseClusteredV2 81 score:1000, srow:605638
37122 chr2 23747165 23747628 wgEncodeRegTfbsClusteredV3 POLR2A score:213, expCount:1, expNums:163, expScores:213, srow:2122626
37122 chr2 23747167 23747696 wgEncodeRegTfbsClusteredV3 TFAP2A score:275, expCount:1, expNums:369, expScores:275, srow:2122627
37122 chr2 23747186 23747701 wgEncodeRegTfbsClusteredV3 TFAP2C score:555, expCount:1, expNums:370, expScores:555, srow:2122628
37122 chr2 23747187 23747430 wgEncodeRegTfbsClusteredV3 FOS score:165, expCount:1, expNums:556, expScores:165, srow:2122629
37122 chr2 23747202 23747564 wgEncodeRegTfbsClusteredV3 MYC score:716, expCount:4, expNums:382,560,624,626, expScores:241,165,716,334, srow:2122630
37122 chr2 23747226 23747621 wgEncodeRegTfbsClusteredV3 MAX score:182, expCount:1, expNums:395, expScores:182, srow:2122631
37122 chr2 23747297 23747311 tfbsConsSites V$BACH1_01 score:903, zScore:3.52, srow:2566907
37122 chr2 23747298 23747310 tfbsConsSites V$AP1_01 score:892, zScore:2.21, srow:2566908
37122 chr2 23747298 23747320 tfbsConsSites V$PPARG_02 score:686, zScore:1.75, srow:2566909
37122 chr2 23747299 23747309 tfbsConsSites V$BACH2_01 score:928, zScore:2.76, srow:2566910
37122 chr2 23747307 23747321 tfbsConsSites V$CDP_02 score:813, zScore:1.67, srow:2566911
37122 chr2 23747307 23747321 tfbsConsSites V$PBX1_02 score:824, zScore:2.19, srow:2566912
37122 chr2 23747316 23747336 tfbsConsSites V$PAX6_01 score:773, zScore:2.04, srow:2566913
37122 chr2 23747396 23747408 tfbsConsSites V$IRF1_01 score:819, zScore:1.9, srow:2566914
37122 chr2 23747396 23747408 tfbsConsSites V$IRF2_01 score:810, zScore:1.84, srow:2566915
37122 chr2 23747439 23747454 tfbsConsSites V$ARNT_01 score:855, zScore:2.01, srow:2566916
37122 chr2 23747268 23747271 phastConsElements100way lod=19 score:285, srow:4427972
37122 chr2 23747310 23747322 phastConsElements100way lod=14 score:255, srow:4427973
37122 chr2 23747333 23747338 phastConsElements100way lod=25 score:312, srow:4427974
37122 chr2 23747357 23747369 phastConsElements100way lod=48 score:377, srow:4427975
37122 chr2 23747376 23747381 phastConsElements100way lod=15 score:262, srow:4427976
37122 chr2 23747400 23747420 phastConsElements100way lod=48 score:377, srow:4427977
37122 chr2 23747087 23749086 cpgShore — values(x.gr)[overs$srow, ]:26547
  • 24 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37122 cellmeth_recounts PrEC: 0, LNCaP: 6, DU145: 5
37122 cellexp id=ENSG00000119771, name=KLHL29, PrEC=967, str=1121, LNCaP=662, str=486, DU145=1193, str=601
37122 tcgaexp gene=KLHL29, entrez=114818, pos=chr2:23608298-23931483(+), B=1223, L=713, M=694, H=687
37122 pubmed gene=KLHL29, G=0, GP=0, GC=0, GM=0, GPM=0, GCM=0