DMR 37199 chr2:85992801-85993000 (200bp)
| DMR Stats | |
|---|---|
| Position | chr2:85992801-85993000 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | ATOH8 (0bp away) |
| ANODEV p-value | 3.53153489654e-05 |
| Frequencies | Benign: 1.0 (14.29%), Low: 1.0 (16.67%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37199 | ATOH8 | 16606 | uc002sqm.4 | chr2 | 85980909 | 86002336 | + | 200 | 100.0 | 0.02 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) | 0.0 |
| 37199 | ATOH8 | 16606 | uc002sqn.3 | chr2 | 85980909 | 86018506 | + | 200 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) | 0.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 37199 | chr2 | 85992186 | 85992955 | wgEncodeRegDnaseClusteredV2 | 38 | score:809, srow:633381 |
| 37199 | chr2 | 85992414 | 85992933 | wgEncodeRegTfbsClusteredV3 | SIN3A | score:216, expCount:1, expNums:357, expScores:216, srow:2229567 |
- 2 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37199 | cellmeth_recounts | PrEC: 0, LNCaP: 1, DU145: 4 |  |
| 37199 | cellexp | id=ENSG00000168874, name=ATOH8, PrEC=0, str=5, LNCaP=2, str=0, DU145=230, str=81 |  |
| 37199 | tcgaexp | gene=ATOH8, entrez=84913, pos=chr2:85980909-86018506(+), B=1885, L=1207, M=1118, H=758 |  |
| 37199 | pubmed | gene=ATOH8, G=14, GP=0, GC=1, GM=1, GPM=0, GCM=0 |  |