DMR 37225 chr2:101627801-101627950 (150bp)
| DMR Stats | |
|---|---|
| Position | chr2:101627801-101627950 (View on UCSC) |
| Width | 150bp |
| Genomic Context | exon |
| Nearest Genes | TBC1D8, RPL31 (0bp away) |
| ANODEV p-value | 0.0145253024231 |
| Frequencies | Benign: 2.0 (28.57%), Low: 2.0 (33.33%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37225 | TBC1D8 | 16754 | uc002tau.4 | chr2 | 101623690 | 101676001 | - | 150 | 100.0 | 0.79 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (25.33), I16 (74.67), E17 (0), I17 (0), E18 (0) | 0.0 |
| 37225 | RPL31 | 16753 | uc010fiu.1 | chr2 | 101618691 | 101636155 | + | 150 | 100.0 | 1.32 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0) | 0.0 |
| 37225 | TBC1D8 | 16754 | uc010fiv.3 | chr2 | 101623690 | 101767846 | - | 150 | 100.0 | 0.57 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (25.33), I18 (74.67), E19 (0), I19 (0), E20 (0) | 0.0 |
| 37225 | RPL31 | 16753 | uc010yvu.1 | chr2 | 101618691 | 101634991 | + | 150 | 100.0 | 0.57 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0) | 0.0 |
| 37225 | RPL31 | 16753 | uc010yvv.1 | chr2 | 101618691 | 101635061 | + | 150 | 100.0 | 0.57 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0) | 0.0 |
- 5 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 37225 | chr2 | 101627561 | 101627835 | wgEncodeRegDnaseClusteredV2 | 5 | score:130, srow:638835 |
| 37225 | chr2 | 101627583 | 101628355 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:444, expCount:5, expNums:61,163,192,403,616, expScores:444,230,271,230,227, srow:2246341 |
| 37225 | chr2 | 101627944 | 101628287 | wgEncodeRegTfbsClusteredV3 | YY1 | score:200, expCount:1, expNums:119, expScores:200, srow:2246342 |
| 37225 | chr2 | 101627923 | 101627923 | cosmic | COSM1004513 | srow:663865 |
| 37225 | chr2 | 101627924 | 101627924 | cosmic | COSM1004515 | srow:663866 |
| 37225 | chr2 | 101627904 | 101627908 | phastConsElements100way | lod=23 | score:304, srow:4699066 |
| 37225 | chr2 | 101627910 | 101627918 | phastConsElements100way | lod=58 | score:395, srow:4699067 |
| 37225 | chr2 | 101627921 | 101627922 | phastConsElements100way | lod=16 | score:268, srow:4699068 |
| 37225 | chr2 | 101627927 | 101627943 | phastConsElements100way | lod=115 | score:463, srow:4699069 |
| 37225 | chr2 | 101627945 | 101627946 | phastConsElements100way | lod=30 | score:330, srow:4699070 |
| 37225 | chr2 | 101627948 | 101627951 | phastConsElements100way | lod=47 | score:375, srow:4699071 |
- 11 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37225 | cellmeth_recounts | PrEC: 3, LNCaP: 0, DU145: 0 |  |
| 37225 | cellexp | id=ENSG00000071082, name=RPL31, PrEC=22930, str=7875, LNCaP=29604, str=17917, DU145=11173, str=8698 |  |
| 37225 | cellexp | id=ENSG00000204634, name=TBC1D8, PrEC=2050, str=1219, LNCaP=897, str=891, DU145=1340, str=1428 |  |
| 37225 | tcgaexp | gene=RPL31, entrez=6160, pos=chr2:101618691-101636155(+), B=34994, L=43071, M=45830, H=43503 |  |
| 37225 | tcgaexp | gene=TBC1D8, entrez=11138, pos=chr2:101623690-101767846(-), B=3914, L=3410, M=3520, H=4064 |  |