DMR 37352 chr2:235909151-235909350 (200bp)

DMR Stats
Positionchr2:235909151-235909350 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesSH3BP4 (0bp away)
ANODEV p-value0.00125425033417
FrequenciesBenign: 2.0 (28.57%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
37352 SH3BP4 17771 uc002vvp.3 chr2 235860628 235964358 + 200 100.0 1.37 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
37352 SH3BP4 17771 uc002vvq.3 chr2 235887347 235964358 + 200 100.0 2.28 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
37352 SH3BP4 17771 uc010fym.3 chr2 235887329 235964358 + 200 100.0 1.26 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37352 chr2 235908741 235909355 wgEncodeRegDnaseClusteredV2 9 score:927, srow:691913
37352 chr2 235908886 235909221 wgEncodeRegTfbsClusteredV3 SP1 score:132, expCount:1, expNums:196, expScores:132, srow:2422079
37352 chr2 235908927 235909306 wgEncodeRegTfbsClusteredV3 ARID3A score:172, expCount:1, expNums:422, expScores:172, srow:2422080
37352 chr2 235908943 235909266 wgEncodeRegTfbsClusteredV3 EP300 score:272, expCount:1, expNums:190, expScores:272, srow:2422081
37352 chr2 235908944 235909203 wgEncodeRegTfbsClusteredV3 FOSL2 score:183, expCount:1, expNums:176, expScores:183, srow:2422082
37352 chr2 235908967 235909256 wgEncodeRegTfbsClusteredV3 HNF4G score:185, expCount:1, expNums:183, expScores:185, srow:2422083
37352 chr2 235909000 235909299 wgEncodeRegTfbsClusteredV3 RXRA score:183, expCount:1, expNums:194, expScores:183, srow:2422084
37352 chr2 235909012 235909231 wgEncodeRegTfbsClusteredV3 ZBTB7A score:174, expCount:1, expNums:205, expScores:174, srow:2422085
37352 chr2 235909022 235909243 wgEncodeRegTfbsClusteredV3 FOXA1 score:1000, expCount:2, expNums:177,178, expScores:928,1000, srow:2422086
37352 chr2 235909049 235909226 wgEncodeRegTfbsClusteredV3 FOXA2 score:701, expCount:1, expNums:179, expScores:701, srow:2422087
37352 chr2 235909060 235909899 wgEncodeRegTfbsClusteredV3 MBD4 score:372, expCount:1, expNums:185, expScores:325, srow:2422088
37352 chr2 235909151 235909826 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:162, expCount:1, expNums:195, expScores:132, srow:2422089
37352 chr2 235909285 235909704 wgEncodeRegTfbsClusteredV3 POLR2A score:349, expCount:1, expNums:192, expScores:349, srow:2422090
37352 chr2 235909303 235909878 wgEncodeRegTfbsClusteredV3 TCF12 score:318, expCount:1, expNums:66, expScores:318, srow:2422091
37352 chr2 235909323 235909938 wgEncodeRegTfbsClusteredV3 MYBL2 score:280, expCount:1, expNums:186, expScores:280, srow:2422092
  • 15 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37352 cellmeth_recounts PrEC: 17, LNCaP: 5, DU145: 1
37352 cellmeth_diffreps_PrECvsLNCaP A=25, B=3, Length=280, Event=Down, log2FC=-3.06, padj=0.000377419596717605
37352 cellmeth_diffreps_PrECvsDU145 A=26, B=1, Length=380, Event=Down, log2FC=-4.7, padj=5.89510044790018e-06
37352 cellexp id=ENSG00000130147, name=SH3BP4, PrEC=9569, str=7399, LNCaP=4450, str=3843, DU145=4243, str=5368
37352 tcgaexp gene=SH3BP4, entrez=23677, pos=chr2:235860628-235964358(+), B=8201, L=9289, M=10081, H=8380