DMR 37372 chr2:239234451-239234600 (150bp)

DMR Stats
Positionchr2:239234451-239234600 (View on UCSC)
Width150bp
Genomic Contextexon
Nearest GenesTRAF3IP1 (0bp away)
ANODEV p-value0.000610288497122
FrequenciesBenign: 1.0 (14.29%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
37372 TRAF3IP1 17800 uc002vye.3 chr2 239229185 239309541 + 150 100.0 0.11 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0) 0.0
37372 TRAF3IP1 17800 uc002vyf.3 chr2 239229185 239309541 + 150 100.0 0.15 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (100), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37372 chr2 239234449 239234471 tfbsConsSites V$OCT1_04 score:826, zScore:2.34, srow:3024048
37372 chr2 239234459 239234469 tfbsConsSites V$POU6F1_01 score:857, zScore:1.99, srow:3024049
37372 chr2 239234460 239234470 tfbsConsSites V$PAX4_02 score:904, zScore:2.13, srow:3024050
37372 chr2 239234482 239234495 tfbsConsSites V$SRF_Q6 score:823, zScore:1.88, srow:3024051
37372 chr2 239234591 239234612 tfbsConsSites V$TCF11MAFG_01 score:795, zScore:2.68, srow:3024052
37372 chr2 239234537 239234537 cosmic COSM1494863 srow:734737
37372 chr2 239234561 239234561 cosmic COSM574187 srow:734738
37372 chr2 239234581 239234581 cosmic COSM397197 srow:734739
37372 chr2 239234444 239234475 phastConsElements100way lod=301 score:558, srow:5217067
37372 chr2 239234477 239234496 phastConsElements100way lod=238 score:535, srow:5217068
37372 chr2 239234498 239234505 phastConsElements100way lod=80 score:427, srow:5217069
37372 chr2 239234507 239234508 phastConsElements100way lod=17 score:274, srow:5217070
37372 chr2 239234510 239234517 phastConsElements100way lod=114 score:462, srow:5217071
37372 chr2 239234520 239234521 phastConsElements100way lod=29 score:327, srow:5217072
37372 chr2 239234525 239234526 phastConsElements100way lod=28 score:323, srow:5217073
37372 chr2 239234528 239234532 phastConsElements100way lod=50 score:381, srow:5217074
37372 chr2 239234534 239234535 phastConsElements100way lod=25 score:312, srow:5217075
37372 chr2 239234537 239234538 phastConsElements100way lod=23 score:304, srow:5217076
37372 chr2 239234540 239234541 phastConsElements100way lod=29 score:327, srow:5217077
37372 chr2 239234543 239234547 phastConsElements100way lod=66 score:408, srow:5217078
37372 chr2 239234549 239234550 phastConsElements100way lod=44 score:368, srow:5217079
37372 chr2 239234552 239234553 phastConsElements100way lod=31 score:333, srow:5217080
37372 chr2 239234555 239234559 phastConsElements100way lod=66 score:408, srow:5217081
37372 chr2 239234561 239234568 phastConsElements100way lod=65 score:407, srow:5217082
37372 chr2 239234570 239234580 phastConsElements100way lod=137 score:481, srow:5217083
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  • 25 of 28 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37372 cellmeth_recounts PrEC: 3, LNCaP: 4, DU145: 0
37372 cellexp id=ENSG00000204104, name=TRAF3IP1, PrEC=1630, str=1372, LNCaP=1259, str=1653, DU145=1099, str=1210
37372 tcgaexp gene=TRAF3IP1, entrez=26146, pos=chr2:239229185-239309541(+), B=1527, L=1337, M=1243, H=1480
37372 pubmed gene=TRAF3IP1, G=13, GP=0, GC=1, GM=0, GPM=0, GCM=0