DMR 37411 chr2:242783801-242784000 (200bp)

DMR Stats
Positionchr2:242783801-242784000 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesPDCD1 (8032bp away)
ANODEV p-value3.46020998556e-05
FrequenciesBenign: 1.0 (14.29%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37411 chr2 242783912 242785911 cpgShore — values(x.gr)[overs$srow, ]:29295
37411 chr2 242781912 242783911 cpgShelf — values(x.gr)[overs$srow, ]:24456
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37411 cellmeth_recounts PrEC: 11, LNCaP: 35, DU145: 1
37411 cellmeth_diffreps_PrECvsDU145 A=80, B=2, Length=820, Event=Down, log2FC=-5.32, padj=0
37411 cellmeth_diffreps_LNCaPvsDU145 A=84.45, B=1.87, Length=920, Event=Down, log2FC=-5.5, padj=0