DMR 37475 chr3:40568601-40568750 (150bp)

DMR Stats
Positionchr3:40568601-40568750 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesZNF621 (0bp away)
ANODEV p-value0.0181320437008
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
37475 ZNF621 20009 uc003ckm.2 chr3 40566376 40581043 + 150 100.0 0.12 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
37475 ZNF621 20009 uc003ckn.2 chr3 40566376 40581043 + 150 100.0 0.54 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
37475 ZNF621 20009 uc003cko.2 chr3 40566376 40581043 + 150 100.0 0.41 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0) 0.0
37475 ZNF621 20009 uc011aze.1 chr3 40567270 40581043 + 150 100.0 0.41 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37475 chr3 40566690 40568689 cpgShore — values(x.gr)[overs$srow, ]:33191
37475 chr3 40568690 40570689 cpgShelf — values(x.gr)[overs$srow, ]:27774
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37475 cellmeth_recounts PrEC: 5, LNCaP: 20, DU145: 31
37475 cellexp id=ENSG00000172888, name=ZNF621, PrEC=1665, str=2216, LNCaP=1618, str=2154, DU145=1702, str=1869
37475 tcgaexp gene=ZNF621, entrez=285268, pos=chr3:40566376-40581043(+), B=1462, L=1300, M=1373, H=1613