DMR 37596 chr3:128035351-128035700 (350bp)
| DMR Stats | |
|---|---|
| Position | chr3:128035351-128035700 (View on UCSC) |
| Width | 350bp |
| Genomic Context | intron |
| Nearest Genes | EEFSEC (0bp away) |
| ANODEV p-value | 7.32808975401e-07 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37596 | EEFSEC | 20678 | uc003eki.3 | chr3 | 127872313 | 128127489 | + | 350 | 100.0 | 0.05 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 37596 | chr3 | 128035301 | 128035735 | wgEncodeRegDnaseClusteredV2 | 26 | score:1000, srow:834206 |
| 37596 | chr3 | 128035641 | 128035655 | tfbsConsSites | V$E2F_01 | score:759, zScore:1.7, srow:3542768 |
| 37596 | chr3 | 128035644 | 128035656 | tfbsConsSites | V$MZF1_02 | score:880, zScore:2.1, srow:3542769 |
| 37596 | chr3 | 128035667 | 128035685 | tfbsConsSites | V$SEF1_C | score:766, zScore:2.58, srow:3542770 |
| 37596 | chr3 | 128035676 | 128035685 | tfbsConsSites | V$NKX22_01 | score:902, zScore:2.17, srow:3542771 |
| 37596 | chr3 | 128035684 | 128035690 | tfbsConsSites | V$SRY_01 | score:1000, zScore:1.69, srow:3542772 |
| 37596 | chr3 | 128035493 | 128035496 | phastConsElements100way | lod=15 | score:262, srow:6108708 |
| 37596 | chr3 | 128035545 | 128035547 | phastConsElements100way | lod=14 | score:255, srow:6108709 |
| 37596 | chr3 | 128035553 | 128035558 | phastConsElements100way | lod=26 | score:316, srow:6108710 |
| 37596 | chr3 | 128035584 | 128035592 | phastConsElements100way | lod=13 | score:247, srow:6108711 |
| 37596 | chr3 | 128035606 | 128035608 | phastConsElements100way | lod=20 | score:290, srow:6108712 |
| 37596 | chr3 | 128035613 | 128035622 | phastConsElements100way | lod=26 | score:316, srow:6108713 |
| 37596 | chr3 | 128035634 | 128035970 | phastConsElements100way | lod=2453 | score:766, srow:6108714 |
- 13 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37596 | cellmeth_recounts | PrEC: 5, LNCaP: 24, DU145: 8 |  |
| 37596 | cellmeth_diffreps_LNCaPvsDU145 | A=16.04, B=0.94, Length=200, Event=Down, log2FC=-4.1, padj=0.00548151537451132 |  |
| 37596 | cellexp | id=ENSG00000132394, name=EEFSEC, PrEC=1332, str=507, LNCaP=2635, str=2251, DU145=550, str=541 |  |
| 37596 | tcgaexp | gene=EEFSEC, entrez=60678, pos=chr3:127872313-128127489(+), B=1432, L=1985, M=1793, H=1718 |  |
| 37596 | pubmed | gene=EEFSEC, G=14, GP=0, GC=0, GM=0, GPM=0, GCM=0 |  |