DMR 37636 chr3:151538451-151538650 (200bp)
| DMR Stats | |
|---|---|
| Position | chr3:151538451-151538650 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | AADAC, MIR548H2 (0bp away) |
| ANODEV p-value | 0.00178120846957 |
| Frequencies | Benign: 2.0 (28.57%), Low: 2.0 (33.33%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37636 | AADAC | 20888 | uc003eze.3 | chr3 | 151531861 | 151546276 | + | 200 | 100.0 | 0.07 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0) | 0.0 |
| 37636 | MIR548H2 | 20885 | uc021xgb.1 | chr3 | 151347320 | 151542394 | + | 200 | 100.0 | 0.07 | 1 | 0.0 | E1 (0), I1 (100), E2 (0) | 0.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 37636 | chr3 | 151538521 | 151538670 | wgEncodeRegDnaseClusteredV2 | 2 | score:130, srow:844607 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37636 | cellmeth_recounts | PrEC: 3, LNCaP: 0, DU145: 19 |  |
| 37636 | cellmeth_diffreps_PrECvsDU145 | A=1, B=25, Length=380, Event=Up, log2FC=4.64, padj=1.10731390676479e-05 |  |
| 37636 | cellmeth_diffreps_LNCaPvsDU145 | A=0, B=30.87, Length=540, Event=Up, log2FC=Inf, padj=2.1699335141742e-08 |  |
| 37636 | cellexp | id=ENSG00000114771, name=AADAC, PrEC=1, str=21, LNCaP=0, str=0, DU145=0, str=0 |  |
| 37636 | cellexp | id=ENSG00000242908, name=RP11-454C18.2, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0 |  |
| 37636 | tcgaexp | gene=AADAC, entrez=13, pos=chr3:151531861-151546276(+), B=1, L=1, M=0, H=2 |  |