DMR 37724 chr4:206351-206500 (150bp)

DMR Stats
Positionchr4:206351-206500 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesZNF876P (0bp away)
ANODEV p-value0.00458830773403
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
37724 ZNF876P 21254 uc010iba.4 chr4 206389 249773 + 112 74.67 0.07 0 100.0 E1 (74.67), I1 (0), E2 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37724 chr4 206166 206715 wgEncodeRegDnaseClusteredV2 95 score:1000, srow:864266
37724 chr4 206079 206688 wgEncodeRegTfbsClusteredV3 SP4 score:272, expCount:1, expNums:155, expScores:272, srow:2988466
37724 chr4 206120 206699 wgEncodeRegTfbsClusteredV3 ATF2 score:348, expCount:1, expNums:134, expScores:348, srow:2988467
37724 chr4 206131 206804 wgEncodeRegTfbsClusteredV3 YY1 score:204, expCount:3, expNums:162,266,579, expScores:204,193,120, srow:2988468
37724 chr4 206145 206408 wgEncodeRegTfbsClusteredV3 CEBPB score:273, expCount:1, expNums:343, expScores:273, srow:2988469
37724 chr4 206164 206553 wgEncodeRegTfbsClusteredV3 SP2 score:205, expCount:1, expNums:154, expScores:205, srow:2988470
37724 chr4 206198 206707 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:5, expNums:146,147,259,610,634, expScores:649,299,258,308,258, srow:2988471
37724 chr4 206202 206525 wgEncodeRegTfbsClusteredV3 SP1 score:412, expCount:1, expNums:153, expScores:412, srow:2988472
37724 chr4 206215 206534 wgEncodeRegTfbsClusteredV3 NFYB score:184, expCount:1, expNums:517, expScores:184, srow:2988473
37724 chr4 206219 206738 wgEncodeRegTfbsClusteredV3 SIN3A score:332, expCount:1, expNums:357, expScores:332, srow:2988474
37724 chr4 206236 206511 wgEncodeRegTfbsClusteredV3 EGR1 score:194, expCount:2, expNums:138,216, expScores:190,194, srow:2988475
37724 chr4 206239 206568 wgEncodeRegTfbsClusteredV3 CHD2 score:169, expCount:1, expNums:345, expScores:169, srow:2988476
37724 chr4 206253 206628 wgEncodeRegTfbsClusteredV3 TBP score:526, expCount:1, expNums:359, expScores:526, srow:2988477
37724 chr4 206272 206653 wgEncodeRegTfbsClusteredV3 TAF1 score:676, expCount:1, expNums:157, expScores:676, srow:2988478
37724 chr4 206303 206666 wgEncodeRegTfbsClusteredV3 GTF2F1 score:181, expCount:1, expNums:349, expScores:181, srow:2988479
37724 chr4 206319 206674 wgEncodeRegTfbsClusteredV3 TAF7 score:239, expCount:1, expNums:158, expScores:239, srow:2988480
37724 chr4 206328 206597 wgEncodeRegTfbsClusteredV3 REST score:156, expCount:1, expNums:257, expScores:156, srow:2988481
37724 chr4 206388 206676 wgEncodeRegTfbsClusteredV3 PHF8 score:457, expCount:1, expNums:30, expScores:457, srow:2988482
37724 chr4 206378 206892 cpgIsland CpG: 49 length:515, cpgNum:49, gcNum:349, perCpg:19, perGc:67.8, obsExp:0.83, srow:19333
37724 chr4 204378 206377 cpgShore — values(x.gr)[overs$srow, ]:34973
  • 20 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37724 cellmeth_recounts PrEC: 0, LNCaP: 1, DU145: 20
37724 cellmeth_diffreps_PrECvsDU145 A=0, B=29, Length=520, Event=Up, log2FC=Inf, padj=2.38379633463664e-08
37724 cellmeth_diffreps_LNCaPvsDU145 A=0, B=13.1, Length=200, Event=Up, log2FC=Inf, padj=0.00251303816158297
37724 cellexp id=ENSG00000198155, name=ZNF876P, PrEC=80, str=78, LNCaP=23, str=22, DU145=58, str=55
37724 tcgaexp gene=YTHDC1, entrez=91746, pos=chr4:6027-69215824(-), B=4512, L=3976, M=4109, H=4458
37724 tcgaexp gene=ZNF876P, entrez=642280, pos=chr4:206389-249773(+), B=45, L=47, M=44, H=53
37724 tcgaexp gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0