DMR 37725 chr4:206801-207000 (200bp)
| DMR Stats | |
|---|---|
| Position | chr4:206801-207000 (View on UCSC) |
| Width | 200bp |
| Genomic Context | promoter |
| Nearest Genes | ZNF876P (0bp away) |
| ANODEV p-value | 3.78439563695e-05 |
| Frequencies | Benign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37725 | ZNF876P | 21254 | uc010iba.4 | chr4 | 206389 | 249773 | + | 200 | 100.0 | 0.07 | 0 | 44.0 | E1 (0), I1 (100), E2 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 37725 | chr4 | 206746 | 207275 | wgEncodeRegDnaseClusteredV2 | 30 | score:358, srow:864267 |
| 37725 | chr4 | 206131 | 206804 | wgEncodeRegTfbsClusteredV3 | YY1 | score:204, expCount:3, expNums:162,266,579, expScores:204,193,120, srow:2988468 |
| 37725 | chr4 | 206378 | 206892 | cpgIsland | CpG: 49 | length:515, cpgNum:49, gcNum:349, perCpg:19, perGc:67.8, obsExp:0.83, srow:19333 |
| 37725 | chr4 | 206893 | 208892 | cpgShore | — | values(x.gr)[overs$srow, ]:34974 |
- 4 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37725 | cellmeth_recounts | PrEC: 0, LNCaP: 3, DU145: 8 |  |
| 37725 | cellexp | id=ENSG00000198155, name=ZNF876P, PrEC=80, str=78, LNCaP=23, str=22, DU145=58, str=55 |  |
| 37725 | tcgaexp | gene=YTHDC1, entrez=91746, pos=chr4:6027-69215824(-), B=4512, L=3976, M=4109, H=4458 |  |
| 37725 | tcgaexp | gene=ZNF876P, entrez=642280, pos=chr4:206389-249773(+), B=45, L=47, M=44, H=53 |  |
| 37725 | tcgaexp | gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0 |  |
| 37725 | pubmed | gene=ZNF876P, G=0, GP=0, GC=0, GM=0, GPM=0, GCM=0 |  |