DMR 37777 chr4:3766551-3766700 (150bp)

DMR Stats
Positionchr4:3766551-3766700 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesADRA2C (1595bp away)
ANODEV p-value0.00154258893791
FrequenciesBenign: 2.0 (28.57%), Low: 1.0 (16.67%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37777 chr4 3766266 3766555 wgEncodeRegDnaseClusteredV2 7 score:407, srow:867558
37777 chr4 3766566 3766575 wgEncodeRegDnaseClusteredV2 2 score:232, srow:867559
37777 chr4 3766586 3766895 wgEncodeRegDnaseClusteredV2 10 score:271, srow:867560
37777 chr4 3765073 3767072 cpgShore — values(x.gr)[overs$srow, ]:35335
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37777 cellmeth_recounts PrEC: 21, LNCaP: 58, DU145: 4
37777 cellmeth_diffreps_PrECvsLNCaP A=24, B=96, Length=460, Event=Up, log2FC=2, padj=9.00214818302776e-10
37777 cellmeth_diffreps_PrECvsLNCaP A=45, B=391, Length=820, Event=Up, log2FC=3.12, padj=0
37777 cellmeth_diffreps_PrECvsDU145 A=74, B=5, Length=860, Event=Down, log2FC=-3.89, padj=0
37777 cellmeth_diffreps_LNCaPvsDU145 A=523.83, B=7.48, Length=1320, Event=Down, log2FC=-6.13, padj=0
37777 tcgaexp gene=UGT2B10, entrez=7365, pos=chr4:393964-69886113(+), B=12, L=1, M=2, H=8
37777 tcgaexp gene=UGT2A3, entrez=79799, pos=chr4:506428-69817509(-), B=1, L=0, M=1, H=1
37777 tcgaexp gene=YTHDC1, entrez=91746, pos=chr4:6027-69215824(-), B=4512, L=3976, M=4109, H=4458
37777 tcgaexp gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0