DMR 37789 chr4:6946501-6946650 (150bp)
| DMR Stats | |
|---|---|
| Position | chr4:6946501-6946650 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | TBC1D14, AX747238 (0bp away) |
| ANODEV p-value | 0.000606880226058 |
| Frequencies | Benign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37789 | TBC1D14 | 21356 | uc003gjs.4 | chr4 | 6911495 | 7034845 | + | 150 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) | 0.0 |
| 37789 | AX747238 | 21357 | uc003gjt.1 | chr4 | 6945338 | 6947476 | + | 150 | 100.0 | 0.04 | 1 | 0.0 | E1 (100) | 100.0 |
| 37789 | TBC1D14 | 21356 | uc011bwg.2 | chr4 | 6911171 | 7034845 | + | 150 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) | 0.0 |
- 3 geness
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37789 | cellmeth_recounts | PrEC: 1, LNCaP: 0, DU145: 0 |  |
| 37789 | cellexp | id=ENSG00000132405, name=TBC1D14, PrEC=3795, str=1937, LNCaP=3325, str=3792, DU145=3883, str=3318 |  |
| 37789 | tcgaexp | gene=UGT2B10, entrez=7365, pos=chr4:393964-69886113(+), B=12, L=1, M=2, H=8 |  |
| 37789 | tcgaexp | gene=TBC1D14, entrez=57533, pos=chr4:6911171-7034845(+), B=4838, L=5099, M=5339, H=5816 |  |
| 37789 | tcgaexp | gene=UGT2A3, entrez=79799, pos=chr4:506428-69817509(-), B=1, L=0, M=1, H=1 |  |
| 37789 | tcgaexp | gene=YTHDC1, entrez=91746, pos=chr4:6027-69215824(-), B=4512, L=3976, M=4109, H=4458 |  |
| 37789 | tcgaexp | gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0 |  |
| 37789 | pubmed | gene=TBC1D14, G=3, GP=0, GC=2, GM=0, GPM=0, GCM=0 |  |