DMR 37958 chr5:463501-463650 (150bp)
| DMR Stats | |
|---|---|
| Position | chr5:463501-463650 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | EXOC3 (0bp away) |
| ANODEV p-value | 0.000782865122774 |
| Frequencies | Benign: 1.0 (14.29%), Low: 1.0 (16.67%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37958 | EXOC3 | 22377 | uc003jba.3 | chr5 | 443334 | 467409 | + | 150 | 100.0 | 0.02 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (100), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 37958 | chr5 | 462888 | 464887 | cpgShore | — | values(x.gr)[overs$srow, ]:36879 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37958 | cellmeth_recounts | PrEC: 0, LNCaP: 10, DU145: 1 |  |
| 37958 | cellexp | id=ENSG00000180104, name=EXOC3, PrEC=2447, str=1621, LNCaP=2870, str=2068, DU145=3269, str=2968 |  |
| 37958 | tcgaexp | gene=EXOC3, entrez=11336, pos=chr5:443334-467409(+), B=3396, L=3370, M=3140, H=2823 |  |
| 37958 | pubmed | gene=EXOC3, G=23, GP=0, GC=4, GM=0, GPM=0, GCM=0 |  |