DMR 37959 chr5:533451-533700 (250bp)

DMR Stats
Positionchr5:533451-533700 (View on UCSC)
Width250bp
Genomic Contextintergenic
Nearest GenesMIR4456 (2254bp away)
ANODEV p-value7.87763316132e-05
FrequenciesBenign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37959 chr5 533146 533495 wgEncodeRegDnaseClusteredV2 8 score:811, srow:925038
37959 chr5 533646 534415 wgEncodeRegDnaseClusteredV2 15 score:524, srow:925039
37959 chr5 533485 535484 cpgShore — values(x.gr)[overs$srow, ]:36901
37959 chr5 530983 533484 cpgShelf — values(x.gr)[overs$srow, ]:31017
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37959 cellmeth_recounts PrEC: 13, LNCaP: 67, DU145: 3
37959 cellmeth_diffreps_PrECvsDU145 A=19, B=0, Length=320, Event=Down, log2FC=-Inf, padj=2.00008702229875e-05
37959 cellmeth_diffreps_LNCaPvsDU145 A=67.35, B=4.68, Length=520, Event=Down, log2FC=-3.85, padj=3.3020913297381e-13