DMR 37961 chr5:633701-633850 (150bp)
| DMR Stats | |
|---|---|
| Position | chr5:633701-633850 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | CEP72 (0bp away) |
| ANODEV p-value | 0.000168840020742 |
| Frequencies | Benign: 2.0 (28.57%), Low: 1.0 (16.67%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37961 | CEP72 | 22384 | uc003jbf.3 | chr5 | 612405 | 653666 | + | 150 | 100.0 | 0.02 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) | 0.0 |
| 37961 | CEP72 | 22384 | uc011clz.1 | chr5 | 612405 | 639339 | + | 150 | 100.0 | 0.02 | 1 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) | 0.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 37961 | chr5 | 633621 | 634095 | wgEncodeRegDnaseClusteredV2 | 40 | score:1000, srow:925140 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 37961 | cellmeth_recounts | PrEC: 3, LNCaP: 4, DU145: 3 |  |
| 37961 | cellmeth_diffreps_PrECvsLNCaP | A=146, B=27, Length=860, Event=Down, log2FC=-2.43, padj=0 |  |
| 37961 | cellmeth_diffreps_PrECvsDU145 | A=147, B=15, Length=920, Event=Down, log2FC=-3.29, padj=0 |  |
| 37961 | cellexp | id=ENSG00000112877, name=CEP72, PrEC=685, str=254, LNCaP=394, str=458, DU145=1049, str=1342 |  |
| 37961 | tcgaexp | gene=CEP72, entrez=55722, pos=chr5:612405-653666(+), B=115, L=129, M=135, H=149 |  |
| 37961 | pubmed | gene=CEP72, G=4, GP=0, GC=2, GM=0, GPM=0, GCM=0 |  |