DMR 37988 chr5:10736501-10736700 (200bp)

DMR Stats
Positionchr5:10736501-10736700 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesDAP (0bp away)
ANODEV p-value1.21800254835e-06
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
37988 DAP 22451 uc003jez.4 chr5 10679342 10761387 - 200 100.0 0.03 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0) 0.0
37988 DAP 22451 uc011cmw.2 chr5 10679342 10761387 - 200 100.0 0.02 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
37988 chr5 10736426 10736875 wgEncodeRegDnaseClusteredV2 7 score:236, srow:930900
37988 chr5 10736101 10736578 wgEncodeRegTfbsClusteredV3 CTCF score:413, expCount:17, expNums:2,5,24,213,290,493,601,603,604,605,606,621,651,653,654,656,679, expScores:132,115,162,190,192,393,125,399,211,413,235,290,101,148,151,106,101, srow:3179870
37988 chr5 10736295 10736818 wgEncodeRegTfbsClusteredV3 HDAC1 score:174, expCount:1, expNums:26, expScores:174, srow:3179873
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
37988 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 0
37988 cellexp id=ENSG00000112977, name=DAP, PrEC=7211, str=4678, LNCaP=9193, str=11217, DU145=10177, str=11814
37988 tcgaexp gene=DAP, entrez=1611, pos=chr5:10679342-10761387(-), B=13420, L=12641, M=13038, H=12853
37988 pubmed gene=DAP, G=3603, GP=21, GC=426, GM=114, GPM=0, GCM=103