DMR 38341 chr6:43394901-43395050 (150bp)

DMR Stats
Positionchr6:43394901-43395050 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesABCC10 (241bp away)
ANODEV p-value0.00780519370121
FrequenciesBenign: 1.0 (14.29%), Low: 1.0 (16.67%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
38341 chr6 43394786 43395055 wgEncodeRegDnaseClusteredV2 2 score:386, srow:1022904
38341 chr6 43394963 43395558 wgEncodeRegTfbsClusteredV3 TCF7L2 score:175, expCount:1, expNums:581, expScores:175, srow:3530564
38341 chr6 43394971 43396029 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:63, expNums:61,62,78,104,105,123,124,130,131,146,147,163,168,191,192,206,207,228,229,249,256,259,275,306,307,308,326,328,330,332,334,336,338,340,362,366,402,403,445,446,461,465,520,521,522,523,525,563,564,577,583,585,596,599,602,613,616,619,622,632,633,634,637, expScores:273,664,835,384,1000,306,510,489,668,347,282,451,884,814,540,206,781,362,1000,155,505,435,468,727,143,259,1000,572,599,1000,353,1000,569,635,166,199,461,310,222,333,174,244,261,375,756,842,317,588,358,159,785,326,389,401,261,278,221,310,568,1000,682,249,165, srow:3530565
38341 chr6 43394984 43396372 wgEncodeRegTfbsClusteredV3 MYC score:620, expCount:14, expNums:382,486,487,488,489,490,560,575,600,611,620,623,624,626, expScores:240,191,599,125,179,148,211,157,147,124,123,254,219,296, srow:3530566
38341 chr6 43395004 43396003 wgEncodeRegTfbsClusteredV3 RBBP5 score:428, expCount:2, expNums:8,33, expScores:175,292, srow:3530567
38341 chr6 43395010 43395697 wgEncodeRegTfbsClusteredV3 TBP score:381, expCount:4, expNums:359,412,452,545, expScores:153,128,231,381, srow:3530568
38341 chr6 43395019 43396035 wgEncodeRegTfbsClusteredV3 MAX score:997, expCount:7, expNums:223,296,352,395,439,511,576, expScores:997,303,163,204,137,365,336, srow:3530569
38341 chr6 43395035 43395992 wgEncodeRegTfbsClusteredV3 MXI1 score:344, expCount:4, expNums:298,353,397,441, expScores:176,185,200,189, srow:3530570
38341 chr6 43395041 43395264 wgEncodeRegTfbsClusteredV3 CEBPB score:138, expCount:1, expNums:425, expScores:138, srow:3530571
38341 chr6 43395043 43395856 wgEncodeRegTfbsClusteredV3 HMGN3 score:216, expCount:1, expNums:501, expScores:136, srow:3530572
38341 chr6 43395046 43395815 wgEncodeRegTfbsClusteredV3 RELA score:250, expCount:3, expNums:282,325,333, expScores:250,221,165, srow:3530573
38341 chr6 43395048 43395417 wgEncodeRegTfbsClusteredV3 EP300 score:163, expCount:1, expNums:304, expScores:163, srow:3530574
38341 chr6 43393189 43395188 cpgShore — values(x.gr)[overs$srow, ]:40097
  • 13 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
38341 cellmeth_recounts PrEC: 4, LNCaP: 6, DU145: 4