DMR 38450 chr7:531951-532150 (200bp)

DMR Stats
Positionchr7:531951-532150 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesPDGFA (4746bp away)
ANODEV p-value0.0129769778876
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
38450 chr7 531926 531975 wgEncodeRegDnaseClusteredV2 2 score:186, srow:1069280
38450 chr7 532006 532715 wgEncodeRegDnaseClusteredV2 16 score:442, srow:1069281
38450 chr7 531427 533426 cpgShore — values(x.gr)[overs$srow, ]:42926
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
38450 cellmeth_recounts PrEC: 21, LNCaP: 8, DU145: 3
38450 cellmeth_diffreps_PrECvsLNCaP A=32, B=6, Length=360, Event=Down, log2FC=-2.42, padj=0.000421855381332352
38450 cellmeth_diffreps_PrECvsDU145 A=32, B=2, Length=380, Event=Down, log2FC=-4, padj=1.36954646948928e-06
38450 cellexp id=ENSG00000234471, name=AC147651.1, PrEC=1, str=0, LNCaP=0, str=0, DU145=0, str=0