DMR 38752 chr7:130008251-130008450 (200bp)

DMR Stats
Positionchr7:130008251-130008450 (View on UCSC)
Width200bp
Genomic Context3' end
Nearest GenesCPA5, AK097910 (0bp away)
ANODEV p-value0.00142571341169
FrequenciesBenign: 2.0 (28.57%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
38752 CPA5 27712 uc003vps.2 chr7 129984630 130008571 + 200 100.0 0.17 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (100) 100.0
38752 CPA5 27712 uc003vpt.2 chr7 129984630 130008571 + 200 100.0 0.17 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (100) 100.0
38752 CPA5 27712 uc003vpu.1 chr7 129984687 130008571 + 200 100.0 0.17 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (100) 100.0
38752 AK097910 27713 uc003vpv.1 chr7 130007190 130009387 - 200 100.0 0.17 1 0.0 E1 (0), I1 (0), E2 (100) 0.0
38752 CPA5 27712 uc010lmd.1 chr7 129984630 130008571 + 200 100.0 0.19 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (100) 100.0
38752 CPA5 27712 uc010lme.1 chr7 129984630 130008571 + 200 100.0 0.19 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (100) 100.0
  • 6 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
38752 chr7 130008258 130008264 tfbsConsSites V$AP2REP_01 score:979, zScore:2.01, srow:4975442
38752 chr7 130008258 130008269 tfbsConsSites V$IK2_01 score:931, zScore:1.67, srow:4975443
38752 chr7 130008262 130008280 tfbsConsSites V$PAX2_01 score:774, zScore:1.78, srow:4975444
38752 chr7 130008282 130008293 tfbsConsSites V$MEIS1_01 score:903, zScore:1.82, srow:4975445
38752 chr7 130008316 130008335 tfbsConsSites V$PPARA_01 score:741, zScore:1.78, srow:4975446
38752 chr7 130008339 130008352 tfbsConsSites V$ELK1_02 score:862, zScore:1.66, srow:4975447
38752 chr7 130008386 130008395 tfbsConsSites V$CDPCR3HD_01 score:910, zScore:2.16, srow:4975448
38752 chr7 130008418 130008432 tfbsConsSites V$BACH1_01 score:807, zScore:1.91, srow:4975449
38752 chr7 130008256 130008256 cosmic COSM1661257 srow:1112790
38752 chr7 130008263 130008263 cosmic COSM1673540 srow:1112791
38752 chr7 130008265 130008265 cosmic COSM598955 srow:1112792
38752 chr7 130008273 130008273 cosmic COSM1249003 srow:1112793
38752 chr7 130008287 130008287 cosmic COSM598954 srow:1112794
38752 chr7 130008293 130008293 cosmic COSM1673541 srow:1112795
38752 chr7 130008311 130008311 cosmic COSM1496516 srow:1112796
38752 chr7 130008324 130008324 cosmic COSM203794 srow:1112797
38752 chr7 130008376 130008376 cosmic COSM1085531 srow:1112798
38752 chr7 130008410 130008410 cosmic COSM1685198 srow:1112799
38752 chr7 130008425 130008425 cosmic COSM1699359 srow:1112800
38752 chr7 130008249 130008260 phastConsElements100way lod=110 score:459, srow:8611061
38752 chr7 130008262 130008263 phastConsElements100way lod=46 score:373, srow:8611062
38752 chr7 130008271 130008272 phastConsElements100way lod=22 score:300, srow:8611063
38752 chr7 130008274 130008284 phastConsElements100way lod=152 score:491, srow:8611064
38752 chr7 130008286 130008287 phastConsElements100way lod=16 score:268, srow:8611065
38752 chr7 130008292 130008302 phastConsElements100way lod=116 score:464, srow:8611066
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  • 25 of 41 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
38752 cellmeth_recounts PrEC: 5, LNCaP: 3, DU145: 1
38752 cellexp id=ENSG00000158525, name=CPA5, PrEC=5, str=9, LNCaP=2, str=3, DU145=5, str=3
38752 tcgaexp gene=CPA5, entrez=93979, pos=chr7:129984630-130008571(+), B=1, L=0, M=1, H=1