DMR 38835 chr8:178001-178150 (150bp)

DMR Stats
Positionchr8:178001-178150 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesRPL23AP53 (0bp away)
ANODEV p-value0.00515940727058
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
38835 RPL23AP53 28079 uc003woq.4 chr8 158345 182318 - 150 100.0 22.54 1 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
38835 RPL23AP53 28079 uc010lra.3 chr8 158345 182318 - 150 100.0 1.01 1 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0) 0.0
38835 RPL23AP53 28079 uc010lrb.4 chr8 158345 182318 - 150 100.0 1.01 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
38835 chr8 177986 178195 wgEncodeRegDnaseClusteredV2 4 score:210, srow:1137112
38835 chr8 177002 179001 cpgShore — values(x.gr)[overs$srow, ]:45690
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
38835 cellmeth_recounts PrEC: 1, LNCaP: 1, DU145: 1
38835 cellexp id=ENSG00000223508, name=RPL23AP53, PrEC=74, str=62, LNCaP=59, str=92, DU145=74, str=82
38835 tcgaexp gene=RPL23AP53, entrez=644128, pos=chr8:158345-182318(-), B=404, L=394, M=390, H=382