DMR 38840 chr8:677251-677400 (150bp)

DMR Stats
Positionchr8:677251-677400 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesERICH1 (0bp away)
ANODEV p-value0.0165729213957
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
38840 ERICH1 28085 uc003wph.3 chr8 614200 681226 - 150 100.0 0.11 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
38840 chr8 677221 677510 wgEncodeRegDnaseClusteredV2 36 score:386, srow:1137531
38840 chr8 677148 677535 wgEncodeRegTfbsClusteredV3 REST score:1000, expCount:12, expNums:59,98,144,167,188,189,226,248,252,257,258,274, expScores:985,1000,1000,1000,1000,497,858,660,1000,590,1000,1000, srow:3921276
38840 chr8 677195 677484 wgEncodeRegTfbsClusteredV3 ZNF143 score:304, expCount:1, expNums:361, expScores:304, srow:3921277
38840 chr8 677335 677355 oreganno OREG0007005 id:OREG0007005, srow:20714
38840 chr8 677379 677406 oreganno OREG0007004 id:OREG0007004, srow:20715
38840 chr8 677067 679066 cpgShelf — values(x.gr)[overs$srow, ]:38483
  • 6 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
38840 cellmeth_recounts PrEC: 7, LNCaP: 8, DU145: 10
38840 cellexp id=ENSG00000104714, name=ERICH1, PrEC=1267, str=1365, LNCaP=798, str=764, DU145=1166, str=1151
38840 tcgaexp gene=ERICH1, entrez=157697, pos=chr8:614200-681226(-), B=505, L=443, M=439, H=425