DMR 38942 chr8:37823251-37823450 (200bp)

DMR Stats
Positionchr8:37823251-37823450 (View on UCSC)
Width200bp
Genomic Contextexon
Nearest GenesADRB3 (0bp away)
ANODEV p-value0.000291422479059
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
38942 ADRB3 28402 uc003xkr.2 chr8 37820514 37824184 - 200 100.0 0.1 0 0.0 E1 (100), I1 (0), E2 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
38942 chr8 37822426 37824655 wgEncodeRegDnaseClusteredV2 55 score:714, srow:1154596
38942 chr8 37822470 37824027 wgEncodeRegTfbsClusteredV3 EZH2 score:1000, expCount:7, expNums:6,15,21,36,38,40,43, expScores:566,239,345,384,187,267,436, srow:3972459
38942 chr8 37822815 37823414 wgEncodeRegTfbsClusteredV3 CTBP2 score:182, expCount:1, expNums:348, expScores:182, srow:3972460
38942 chr8 37823166 37823835 wgEncodeRegTfbsClusteredV3 RBBP5 score:316, expCount:1, expNums:8, expScores:316, srow:3972461
38942 chr8 37823221 37823516 wgEncodeRegTfbsClusteredV3 FOXP2 score:202, expCount:1, expNums:255, expScores:202, srow:3972462
38942 chr8 37823295 37823613 wgEncodeRegTfbsClusteredV3 SUZ12 score:193, expCount:2, expNums:358,578, expScores:190,193, srow:3972463
38942 chr8 37823263 37823291 tfbsConsSites V$MYOGNF1_01 score:735, zScore:1.68, srow:5097301
38942 chr8 37823286 37823302 tfbsConsSites V$RFX1_01 score:832, zScore:1.96, srow:5097302
38942 chr8 37823360 37823373 tfbsConsSites V$GATA1_03 score:850, zScore:1.73, srow:5097303
38942 chr8 37823434 37823448 tfbsConsSites V$TAXCREB_01 score:790, zScore:1.94, srow:5097304
38942 chr8 37823443 37823461 tfbsConsSites V$AHRARNT_02 score:774, zScore:1.73, srow:5097305
38942 chr8 37823448 37823462 tfbsConsSites V$E2F_01 score:760, zScore:1.72, srow:5097306
38942 chr8 37823450 37823467 tfbsConsSites V$AP4_01 score:810, zScore:1.65, srow:5097307
38942 chr8 37823423 37823424 cosmic COSM1666469 srow:1140771
38942 chr8 37823248 37823258 phastConsElements100way lod=64 score:405, srow:8803482
38942 chr8 37823271 37823276 phastConsElements100way lod=27 score:320, srow:8803483
38942 chr8 37823287 37823289 phastConsElements100way lod=35 score:345, srow:8803484
38942 chr8 37823296 37823300 phastConsElements100way lod=43 score:366, srow:8803485
38942 chr8 37823304 37823306 phastConsElements100way lod=31 score:333, srow:8803486
38942 chr8 37823308 37823309 phastConsElements100way lod=29 score:327, srow:8803487
38942 chr8 37823311 37823312 phastConsElements100way lod=16 score:268, srow:8803488
38942 chr8 37823314 37823332 phastConsElements100way lod=201 score:518, srow:8803489
38942 chr8 37823335 37823335 phastConsElements100way lod=14 score:255, srow:8803490
38942 chr8 37823338 37823339 phastConsElements100way lod=32 score:337, srow:8803491
38942 chr8 37823341 37823342 phastConsElements100way lod=44 score:368, srow:8803492
  • Page 1 of 2
  • 25 of 33 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
38942 cellmeth_recounts PrEC: 0, LNCaP: 239, DU145: 26
38942 cellmeth_diffreps_PrECvsLNCaP A=11, B=479, Length=1380, Event=Up, log2FC=5.44, padj=0
38942 cellmeth_diffreps_PrECvsDU145 A=0, B=21, Length=320, Event=Up, log2FC=Inf, padj=5.26387855513023e-06
38942 cellmeth_diffreps_LNCaPvsDU145 A=582.63, B=74.83, Length=1760, Event=Down, log2FC=-2.96, padj=0
38942 cellexp id=ENSG00000188778, name=ADRB3, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
38942 tcgameth site:cg09258813, B=0.04, L=0.18, H=0.22
38942 tcgaexp gene=ADRB3, entrez=155, pos=chr8:37820514-37824184(-), B=24, L=13, M=4, H=2
38942 pubmed gene=ADRB3, G=190, GP=1, GC=17, GM=1, GPM=0, GCM=0