DMR 39207 chr8:145596851-145597000 (150bp)

DMR Stats
Positionchr8:145596851-145597000 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesADCK5 (730bp away)
ANODEV p-value0.00168663619261
FrequenciesBenign: 2.0 (28.57%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39207 chr8 145596346 145597375 wgEncodeRegDnaseClusteredV2 124 score:1000, srow:1197483
39207 chr8 145596228 145598035 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:66, expNums:61,62,78,104,105,123,124,130,131,146,147,163,168,191,192,206,207,228,229,249,256,259,275,283,306,307,308,326,328,330,332,334,336,338,340,362,366,402,403,445,446,461,465,520,521,522,523,524,525,563,564,577,583,585,596,599,602,610,613,616,619,622,632,633,634,637, expScores:1000,1000,1000,1000,379,549,778,656,1000,469,688,409,295,555,706,751,1000,576,393,341,386,1000,1000,481,269,496,272,1000,1000,1000,1000,1000,1000,1000,1000,584,590,1000,460,97,571,230,717,475,441,648,588,219,274,942,1000,174,1000,179,1000,730,395,158,799,505,739,354,1000,1000,212,740, srow:4108585
39207 chr8 145596274 145596957 wgEncodeRegTfbsClusteredV3 MYC score:439, expCount:6, expNums:487,489,560,561,624,626, expScores:154,239,137,150,219,439, srow:4108587
39207 chr8 145596373 145596873 wgEncodeRegTfbsClusteredV3 SP1 score:296, expCount:3, expNums:112,153,196, expScores:207,183,296, srow:4108593
39207 chr8 145596417 145596966 wgEncodeRegTfbsClusteredV3 MAZ score:800, expCount:4, expNums:297,396,440,512, expScores:401,208,384,184, srow:4108595
39207 chr8 145596489 145596858 wgEncodeRegTfbsClusteredV3 CHD2 score:222, expCount:1, expNums:380, expScores:222, srow:4108598
39207 chr8 145596561 145597136 wgEncodeRegTfbsClusteredV3 KDM5B score:329, expCount:1, expNums:31, expScores:329, srow:4108599
39207 chr8 145596575 145597198 wgEncodeRegTfbsClusteredV3 PHF8 score:386, expCount:1, expNums:30, expScores:386, srow:4108600
39207 chr8 145596589 145596992 wgEncodeRegTfbsClusteredV3 MXI1 score:148, expCount:1, expNums:397, expScores:148, srow:4108601
39207 chr8 145596589 145596964 wgEncodeRegTfbsClusteredV3 TBP score:345, expCount:1, expNums:545, expScores:345, srow:4108602
39207 chr8 145596590 145597045 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:154, expCount:1, expNums:195, expScores:154, srow:4108603
39207 chr8 145596627 145596950 wgEncodeRegTfbsClusteredV3 CEBPB score:210, expCount:1, expNums:212, expScores:210, srow:4108604
39207 chr8 145596631 145597050 wgEncodeRegTfbsClusteredV3 TAF1 score:193, expCount:1, expNums:199, expScores:193, srow:4108605
39207 chr8 145596688 145597268 wgEncodeRegTfbsClusteredV3 JUND score:278, expCount:3, expNums:435,507,594, expScores:166,219,278, srow:4108606
39207 chr8 145596730 145596907 wgEncodeRegTfbsClusteredV3 MAX score:203, expCount:1, expNums:223, expScores:203, srow:4108607
39207 chr8 145596802 145597305 wgEncodeRegTfbsClusteredV3 CHD1 score:166, expCount:1, expNums:23, expScores:166, srow:4108608
39207 chr8 145596864 145597167 wgEncodeRegTfbsClusteredV3 FOXP2 score:129, expCount:1, expNums:251, expScores:129, srow:4108609
39207 chr8 145596899 145597102 wgEncodeRegTfbsClusteredV3 CTCF score:204, expCount:1, expNums:629, expScores:204, srow:4108610
39207 chr8 145596979 145597258 wgEncodeRegTfbsClusteredV3 CREB1 score:146, expCount:1, expNums:47, expScores:146, srow:4108611
39207 chr8 145595415 145597414 cpgShore — values(x.gr)[overs$srow, ]:47480
  • 20 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
39207 cellmeth_recounts PrEC: 32, LNCaP: 11, DU145: 1
39207 cellmeth_diffreps_PrECvsLNCaP A=48, B=9, Length=380, Event=Down, log2FC=-2.42, padj=3.71732322340544e-06
39207 cellmeth_diffreps_PrECvsDU145 A=48, B=1, Length=400, Event=Down, log2FC=-5.58, padj=3.50148261699341e-12
39207 cellexp id=ENSG00000173137, name=ADCK5, PrEC=740, str=567, LNCaP=593, str=368, DU145=343, str=239
39207 tcgameth site:cg01915822, B=0.76, L=0.75, H=0.68
39207 tcgameth site:cg07776993, B=0.93, L=0.95, H=0.88