DMR 39231 chr9:6632601-6632750 (150bp)

DMR Stats
Positionchr9:6632601-6632750 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesGLDC (0bp away)
ANODEV p-value0.00304074789716
FrequenciesBenign: 1.0 (14.29%), Low: 2.0 (33.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
39231 GLDC 29153 uc003zkc.3 chr9 6532464 6645692 - 150 100.0 0.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39231 chr9 6632526 6632915 wgEncodeRegDnaseClusteredV2 33 score:1000, srow:1200768
39231 chr9 6632274 6633122 wgEncodeRegTfbsClusteredV3 NFIC score:287, expCount:1, expNums:97, expScores:234, srow:4120534
39231 chr9 6632439 6633127 wgEncodeRegTfbsClusteredV3 POLR2A score:554, expCount:12, expNums:104,105,124,130,131,306,328,330,332,336,338,340, expScores:366,407,269,260,399,554,373,267,263,361,205,261, srow:4120535
39231 chr9 6632483 6633166 wgEncodeRegTfbsClusteredV3 PML score:282, expCount:1, expNums:103, expScores:282, srow:4120536
39231 chr9 6632490 6632753 wgEncodeRegTfbsClusteredV3 RAD21 score:115, expCount:1, expNums:310, expScores:115, srow:4120537
39231 chr9 6632499 6633018 wgEncodeRegTfbsClusteredV3 FOXM1 score:279, expCount:1, expNums:90, expScores:279, srow:4120538
39231 chr9 6632506 6632849 wgEncodeRegTfbsClusteredV3 YY1 score:181, expCount:1, expNums:119, expScores:181, srow:4120539
39231 chr9 6632527 6633122 wgEncodeRegTfbsClusteredV3 NFATC1 score:270, expCount:1, expNums:96, expScores:270, srow:4120540
39231 chr9 6632531 6632973 wgEncodeRegTfbsClusteredV3 MAZ score:197, expCount:2, expNums:297,440, expScores:197,133, srow:4120541
39231 chr9 6632554 6632883 wgEncodeRegTfbsClusteredV3 BHLHE40 score:257, expCount:1, expNums:284, expScores:257, srow:4120542
39231 chr9 6632593 6633028 wgEncodeRegTfbsClusteredV3 MAX score:169, expCount:1, expNums:296, expScores:169, srow:4120543
39231 chr9 6632595 6633030 wgEncodeRegTfbsClusteredV3 MXI1 score:209, expCount:1, expNums:298, expScores:209, srow:4120544
39231 chr9 6632604 6632919 wgEncodeRegTfbsClusteredV3 PAX5 score:1000, expCount:4, expNums:100,101,122,129, expScores:1000,735,268,358, srow:4120545
39231 chr9 6632613 6633006 wgEncodeRegTfbsClusteredV3 RELA score:195, expCount:2, expNums:282,325, expScores:195,172, srow:4120546
39231 chr9 6632624 6633003 wgEncodeRegTfbsClusteredV3 TBP score:138, expCount:1, expNums:317, expScores:138, srow:4120547
39231 chr9 6632627 6632930 wgEncodeRegTfbsClusteredV3 ESR1 score:105, expCount:1, expNums:74, expScores:105, srow:4120548
39231 chr9 6632633 6632872 wgEncodeRegTfbsClusteredV3 EGR1 score:188, expCount:1, expNums:87, expScores:188, srow:4120549
39231 chr9 6632639 6633018 wgEncodeRegTfbsClusteredV3 CHD2 score:156, expCount:1, expNums:288, expScores:156, srow:4120550
39231 chr9 6632651 6632990 wgEncodeRegTfbsClusteredV3 TAF1 score:142, expCount:1, expNums:115, expScores:142, srow:4120551
39231 chr9 6632651 6632980 wgEncodeRegTfbsClusteredV3 IRF4 score:278, expCount:1, expNums:92, expScores:278, srow:4120552
39231 chr9 6632656 6633011 wgEncodeRegTfbsClusteredV3 BCL3 score:139, expCount:1, expNums:83, expScores:139, srow:4120553
39231 chr9 6632672 6632963 wgEncodeRegTfbsClusteredV3 RUNX3 score:957, expCount:1, expNums:109, expScores:957, srow:4120554
39231 chr9 6632674 6632953 wgEncodeRegTfbsClusteredV3 BCL11A score:244, expCount:1, expNums:82, expScores:244, srow:4120555
39231 chr9 6632717 6632958 wgEncodeRegTfbsClusteredV3 SPI1 score:1000, expCount:2, expNums:107,126, expScores:1000,1000, srow:4120556
  • 24 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
39231 cellmeth_recounts PrEC: 0, LNCaP: 4, DU145: 4
39231 cellexp id=ENSG00000178445, name=GLDC, PrEC=78, str=295, LNCaP=445, str=549, DU145=703, str=601
39231 tcgaexp gene=GLDC, entrez=2731, pos=chr9:6532464-6645692(-), B=213, L=121, M=318, H=296