DMR 39240 chr9:33139751-33140100 (350bp)

DMR Stats
Positionchr9:33139751-33140100 (View on UCSC)
Width350bp
Genomic Contextintron
Nearest GenesB4GALT1 (0bp away)
ANODEV p-value3.96089366197e-05
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
39240 B4GALT1 29289 uc003zsg.2 chr9 33110639 33167356 - 350 100.0 0.11 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39240 chr9 33139446 33140255 wgEncodeRegDnaseClusteredV2 86 score:1000, srow:1207438
39240 chr9 33139676 33139955 wgEncodeRegTfbsClusteredV3 CTCF score:189, expCount:1, expNums:662, expScores:189, srow:4139379
39240 chr9 33139719 33140334 wgEncodeRegTfbsClusteredV3 MYBL2 score:308, expCount:1, expNums:186, expScores:308, srow:4139380
39240 chr9 33139733 33140092 wgEncodeRegTfbsClusteredV3 TBP score:119, expCount:1, expNums:452, expScores:119, srow:4139381
39240 chr9 33139741 33140196 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:252, expCount:1, expNums:195, expScores:252, srow:4139382
39240 chr9 33139747 33140122 wgEncodeRegTfbsClusteredV3 YY1 score:140, expCount:1, expNums:203, expScores:140, srow:4139383
39240 chr9 33139750 33140179 wgEncodeRegTfbsClusteredV3 POLR2A score:278, expCount:1, expNums:61, expScores:278, srow:4139384
39240 chr9 33139783 33140086 wgEncodeRegTfbsClusteredV3 FOXP2 score:244, expCount:1, expNums:251, expScores:244, srow:4139385
39240 chr9 33139785 33140142 wgEncodeRegTfbsClusteredV3 MAX score:1000, expCount:4, expNums:223,439,511,576, expScores:442,481,178,1000, srow:4139386
39240 chr9 33139787 33140110 wgEncodeRegTfbsClusteredV3 CEBPB score:738, expCount:6, expNums:172,212,425,426,462,477, expScores:180,208,403,499,738,325, srow:4139387
39240 chr9 33139790 33140113 wgEncodeRegTfbsClusteredV3 E2F6 score:136, expCount:1, expNums:215, expScores:136, srow:4139388
39240 chr9 33139796 33140135 wgEncodeRegTfbsClusteredV3 HDAC2 score:169, expCount:1, expNums:181, expScores:169, srow:4139389
39240 chr9 33139800 33140115 wgEncodeRegTfbsClusteredV3 MYC score:686, expCount:2, expNums:575,614, expScores:686,322, srow:4139390
39240 chr9 33139802 33140125 wgEncodeRegTfbsClusteredV3 EP300 score:270, expCount:1, expNums:190, expScores:270, srow:4139391
39240 chr9 33139813 33140148 wgEncodeRegTfbsClusteredV3 SP1 score:263, expCount:1, expNums:196, expScores:263, srow:4139392
39240 chr9 33139817 33140072 wgEncodeRegTfbsClusteredV3 JUND score:183, expCount:1, expNums:184, expScores:183, srow:4139393
39240 chr9 33139827 33140090 wgEncodeRegTfbsClusteredV3 USF2 score:241, expCount:1, expNums:455, expScores:241, srow:4139394
39240 chr9 33139892 33140035 wgEncodeRegTfbsClusteredV3 USF1 score:824, expCount:1, expNums:202, expScores:824, srow:4139395
39240 chr9 33139900 33140046 wgEncodeRegTfbsClusteredV3 MXI1 score:719, expCount:1, expNums:441, expScores:719, srow:4139396
39240 chr9 33139908 33140047 wgEncodeRegTfbsClusteredV3 RXRA score:626, expCount:1, expNums:194, expScores:626, srow:4139397
39240 chr9 33140051 33140326 wgEncodeRegTfbsClusteredV3 MAFF score:156, expCount:1, expNums:436, expScores:156, srow:4139398
39240 chr9 33139878 33139888 tfbsConsSites V$FOXO4_01 score:907, zScore:1.65, srow:5356260
39240 chr9 33139878 33139891 tfbsConsSites V$FAC1_01 score:841, zScore:1.81, srow:5356261
39240 chr9 33139878 33139893 tfbsConsSites V$FREAC3_01 score:842, zScore:2.46, srow:5356262
39240 chr9 33139912 33139925 tfbsConsSites V$CEBPA_01 score:884, zScore:1.82, srow:5356263
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  • 25 of 42 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
39240 cellmeth_recounts PrEC: 5, LNCaP: 5, DU145: 9
39240 cellexp id=ENSG00000086062, name=B4GALT1, PrEC=20504, str=85239, LNCaP=8601, str=8605, DU145=11267, str=13460
39240 tcgaexp gene=B4GALT1, entrez=2683, pos=chr9:33110639-33167356(-), B=10601, L=9763, M=9306, H=8816
39240 pubmed gene=B4GALT1, G=30, GP=1, GC=12, GM=3, GPM=0, GCM=3