DMR 39243 chr9:33861251-33861400 (150bp)
| DMR Stats | |
|---|---|
| Position | chr9:33861251-33861400 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | UBE2R2 (0bp away) |
| ANODEV p-value | 0.0124262023968 |
| Frequencies | Benign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39243 | UBE2R2 | 29312 | uc003ztm.3 | chr9 | 33817182 | 33920401 | + | 150 | 100.0 | 0.25 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) | 0.0 |
- 1 genes
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 39243 | cellmeth_recounts | PrEC: 2, LNCaP: 1, DU145: 19 |  |
| 39243 | cellmeth_diffreps_PrECvsDU145 | A=1, B=22, Length=320, Event=Up, log2FC=4.46, padj=7.31546672071902e-05 |  |
| 39243 | cellmeth_diffreps_LNCaPvsDU145 | A=0, B=14.97, Length=220, Event=Up, log2FC=Inf, padj=0.000816028517810598 |  |
| 39243 | cellexp | id=ENSG00000107341, name=UBE2R2, PrEC=6069, str=6956, LNCaP=6306, str=6468, DU145=7830, str=8388 |  |
| 39243 | tcgaexp | gene=UBE2R2, entrez=54926, pos=chr9:33817182-33920401(+), B=4680, L=6072, M=5662, H=6091 |  |