DMR 39255 chr9:37917901-37918050 (150bp)

DMR Stats
Positionchr9:37917901-37918050 (View on UCSC)
Width150bp
Genomic Contextexon
Nearest GenesSHB (0bp away)
ANODEV p-value0.0141162087915
FrequenciesBenign: 1.0 (14.29%), Low: 1.0 (16.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
39255 SHB 29411 uc004aax.3 chr9 37915895 38069210 - 150 100.0 0.12 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (100) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39255 chr9 37917781 37918130 wgEncodeRegDnaseClusteredV2 6 score:118, srow:1210629
39255 chr9 37917762 37918005 wgEncodeRegTfbsClusteredV3 MAX score:163, expCount:1, expNums:460, expScores:163, srow:4151810
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
39255 cellmeth_recounts PrEC: 1, LNCaP: 3, DU145: 5
39255 cellexp id=ENSG00000255872, name=RP11-613M10.9, PrEC=0, str=0, LNCaP=0, str=0, DU145=1, str=0
39255 tcgaexp gene=SHB, entrez=6461, pos=chr9:37915895-38069210(-), B=2078, L=2159, M=1812, H=1297