DMR 394 chr1:100442851-100443000 (150bp)

DMR Stats
Positionchr1:100442851-100443000 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesSLC35A3 (0bp away)
ANODEV p-value0.00628769317412
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
394 SLC35A3 1213 uc001dsp.2 chr1 100435345 100492534 + 150 100.0 0.03 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
394 SLC35A3 1213 uc001dsr.2 chr1 100435992 100492534 + 150 100.0 0.02 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
394 SLC35A3 1213 uc009wdy.2 chr1 100435345 100492534 + 150 100.0 0.02 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
394 cellmeth_recounts PrEC: 4, LNCaP: 6, DU145: 10
394 cellexp id=ENSG00000117620, name=SLC35A3, PrEC=2388, str=6027, LNCaP=2986, str=4006, DU145=2246, str=2848
394 tcgaexp gene=SLC35A3, entrez=23443, pos=chr1:100435345-100492534(+), B=1722, L=2201, M=2055, H=2245
394 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305