DMR 39448 chr9:132949301-132949500 (200bp)

DMR Stats
Positionchr9:132949301-132949500 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesNCS1 (0bp away)
ANODEV p-value6.39929028912e-06
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
39448 NCS1 30180 uc004bzi.2 chr9 132934857 132999583 + 200 100.0 0.15 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39448 chr9 132948866 132949515 wgEncodeRegDnaseClusteredV2 20 score:596, srow:1244644
39448 chr9 132948913 132949342 wgEncodeRegTfbsClusteredV3 E2F6 score:135, expCount:1, expNums:495, expScores:135, srow:4261207
39448 chr9 132949090 132949365 wgEncodeRegTfbsClusteredV3 ELF1 score:170, expCount:1, expNums:217, expScores:170, srow:4261208
39448 chr9 132949134 132949983 wgEncodeRegTfbsClusteredV3 SMARCC1 score:390, expCount:1, expNums:371, expScores:281, srow:4261209
39448 chr9 132949192 132949815 wgEncodeRegTfbsClusteredV3 PHF8 score:369, expCount:1, expNums:30, expScores:369, srow:4261210
39448 chr9 132949199 132949722 wgEncodeRegTfbsClusteredV3 HDAC1 score:193, expCount:1, expNums:26, expScores:193, srow:4261211
39448 chr9 132949230 132949879 wgEncodeRegTfbsClusteredV3 POLR2A score:919, expCount:13, expNums:61,62,78,163,168,192,445,524,525,583,613,633,634, expScores:913,712,333,435,377,374,122,160,201,919,158,379,205, srow:4261212
39448 chr9 132949262 132949848 wgEncodeRegTfbsClusteredV3 ZNF263 score:1000, expCount:2, expNums:368,553, expScores:1000,168, srow:4261213
39448 chr9 132949296 132949537 wgEncodeRegTfbsClusteredV3 CTCF score:259, expCount:3, expNums:595,628,630, expScores:219,259,175, srow:4261214
39448 chr9 132949412 132949815 wgEncodeRegTfbsClusteredV3 ZBTB7A score:168, expCount:1, expNums:247, expScores:168, srow:4261215
39448 chr9 132949416 132949879 wgEncodeRegTfbsClusteredV3 MAZ score:379, expCount:2, expNums:396,512, expScores:254,379, srow:4261216
39448 chr9 132949417 132949909 wgEncodeRegTfbsClusteredV3 MYC score:237, expCount:2, expNums:487,626, expScores:237,202, srow:4261217
39448 chr9 132949422 132949877 wgEncodeRegTfbsClusteredV3 GTF2F1 score:179, expCount:1, expNums:389, expScores:179, srow:4261218
39448 chr9 132949426 132949809 wgEncodeRegTfbsClusteredV3 RCOR1 score:300, expCount:1, expNums:383, expScores:300, srow:4261219
39448 chr9 132949434 132949856 wgEncodeRegTfbsClusteredV3 MAX score:356, expCount:3, expNums:223,395,511, expScores:261,356,225, srow:4261220
39448 chr9 132949444 132949839 wgEncodeRegTfbsClusteredV3 JUNB score:290, expCount:1, expNums:593, expScores:290, srow:4261221
39448 chr9 132949447 132949850 wgEncodeRegTfbsClusteredV3 MXI1 score:230, expCount:1, expNums:397, expScores:230, srow:4261222
39448 chr9 132949448 132949787 wgEncodeRegTfbsClusteredV3 JUN score:485, expCount:6, expNums:346,381,480,481,482,484, expScores:160,421,248,124,121,485, srow:4261223
39448 chr9 132949453 132949716 wgEncodeRegTfbsClusteredV3 CEBPB score:270, expCount:1, expNums:378, expScores:270, srow:4261224
39448 chr9 132949456 132949831 wgEncodeRegTfbsClusteredV3 TBP score:134, expCount:1, expNums:545, expScores:134, srow:4261225
39448 chr9 132949457 132949746 wgEncodeRegTfbsClusteredV3 ZNF143 score:155, expCount:1, expNums:419, expScores:155, srow:4261226
39448 chr9 132949463 132949762 wgEncodeRegTfbsClusteredV3 NR3C1 score:148, expCount:1, expNums:56, expScores:148, srow:4261227
39448 chr9 132949466 132949975 wgEncodeRegTfbsClusteredV3 SMARCC2 score:217, expCount:1, expNums:372, expScores:217, srow:4261228
39448 chr9 132949467 132949986 wgEncodeRegTfbsClusteredV3 ESR1 score:500, expCount:3, expNums:73,74,75, expScores:152,187,210, srow:4261229
39448 chr9 132949471 132949750 wgEncodeRegTfbsClusteredV3 CREB1 score:134, expCount:1, expNums:47, expScores:134, srow:4261230
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  • 25 of 36 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
39448 cellmeth_recounts PrEC: 4, LNCaP: 4, DU145: 0
39448 cellexp id=ENSG00000107130, name=NCS1, PrEC=7834, str=7251, LNCaP=3404, str=3651, DU145=4778, str=5052
39448 tcgaexp gene=NCS1, entrez=23413, pos=chr9:132934857-132999583(+), B=6087, L=3698, M=2878, H=2527
39448 pubmed gene=NCS1, G=31, GP=0, GC=2, GM=0, GPM=0, GCM=0