DMR 39532 chr9:139498851-139499000 (150bp)

DMR Stats
Positionchr9:139498851-139499000 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesAF161442 (44061bp away)
ANODEV p-value0.0040402951792
FrequenciesBenign: 2.0 (28.57%), Low: 1.0 (16.67%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39532 chr9 139498086 139499075 wgEncodeRegDnaseClusteredV2 35 score:699, srow:1251169
39532 chr9 139498941 139499210 wgEncodeRegTfbsClusteredV3 GTF3C2 score:134, expCount:1, expNums:546, expScores:134, srow:4279545
39532 chr9 139498945 139499234 wgEncodeRegTfbsClusteredV3 ZNF143 score:189, expCount:1, expNums:552, expScores:189, srow:4279546
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
39532 cellmeth_recounts PrEC: 16, LNCaP: 5, DU145: 9
39532 cellmeth_diffreps_PrECvsLNCaP A=106, B=19, Length=660, Event=Down, log2FC=-2.48, padj=3.99501030482688e-14
39532 cellmeth_diffreps_PrECvsDU145 A=87, B=17, Length=440, Event=Down, log2FC=-2.36, padj=9.21397449244619e-11