DMR 3954 chr7:32665701-32665900 (200bp)

DMR Stats
Positionchr7:32665701-32665900 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesDPY19L1P1, AVL9 (0bp away)
ANODEV p-value0.000180325760238
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
3954 DPY19L1P1 26843 uc003tcw.3 chr7 32620553 32758780 - 200 100.0 2.1 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (100), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0) 0.0
3954 AVL9 26842 uc011kai.2 chr7 32535176 33079036 + 200 100.0 0.23 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
3954 chr7 32665745 32665753 phastConsElements100way lod=13 score:247, srow:8309285
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
3954 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 5
3954 cellexp id=ENSG00000105778, name=AVL9, PrEC=4979, str=3933, LNCaP=4485, str=5980, DU145=3641, str=4119
3954 cellexp id=ENSG00000229358, name=DPY19L1P1, PrEC=87, str=44, LNCaP=38, str=40, DU145=334, str=431
3954 tcgaexp gene=AVL9, entrez=23080, pos=chr7:32535176-33079036(+), B=814, L=1056, M=1165, H=1202