DMR 39645 chr10:63170001-63170150 (150bp)
| DMR Stats | |
|---|---|
| Position | chr10:63170001-63170150 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | TMEM26 (0bp away) |
| ANODEV p-value | 0.00146200517172 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39645 | TMEM26 | 3306 | uc001jlo.2 | chr10 | 63166401 | 63213208 | - | 150 | 100.0 | 0.98 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (100) | 0.0 |
| 39645 | TMEM26 | 3306 | uc001jlp.1 | chr10 | 63169207 | 63174871 | - | 150 | 100.0 | 0.08 | 1 | 0.0 | E1 (0), I1 (0), E2 (100) | 100.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 39645 | chr10 | 63169533 | 63170028 | wgEncodeRegTfbsClusteredV3 | GATA3 | score:278, expCount:1, expNums:570, expScores:278, srow:517655 |
| 39645 | chr10 | 63169536 | 63170105 | wgEncodeRegTfbsClusteredV3 | ZNF217 | score:222, expCount:1, expNums:574, expScores:222, srow:517656 |
| 39645 | chr10 | 63170086 | 63170509 | wgEncodeRegTfbsClusteredV3 | CTCF | score:1000, expCount:11, expNums:24,213,493,598,621,627,628,629,630,631,680, expScores:263,142,245,174,174,729,1000,1000,579,955,321, srow:517658 |
| 39645 | chr10 | 63170102 | 63170531 | wgEncodeRegTfbsClusteredV3 | E2F6 | score:291, expCount:2, expNums:215,495, expScores:291,146, srow:517659 |
| 39645 | chr10 | 63170087 | 63170087 | cosmic | COSM1603602 | srow:147907 |
| 39645 | chr10 | 63170096 | 63170096 | cosmic | COSM684773 | srow:147908 |
| 39645 | chr10 | 63170105 | 63170105 | cosmic | COSM684772 | srow:147909 |
| 39645 | chr10 | 63170124 | 63170124 | cosmic | COSM338127 | srow:147910 |
| 39645 | chr10 | 63170136 | 63170136 | cosmic | COSM1229670 | srow:147911 |
| 39645 | chr10 | 63170129 | 63170130 | phastConsElements100way | lod=17 | score:274, srow:1035612 |
- 10 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 39645 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 6 |  |
| 39645 | cellexp | id=ENSG00000196932, name=TMEM26, PrEC=0, str=0, LNCaP=0, str=0, DU145=1, str=0 |  |
| 39645 | tcgameth | site:cg00960781, B=0.86, L=0.94, H=0.92 |  |
| 39645 | tcgaexp | gene=DUX4, entrez=22947, pos=chr10:76142-191000255(+), B=0, L=0, M=0, H=0 |  |
| 39645 | tcgaexp | gene=TMEM26, entrez=219623, pos=chr10:63166401-63213208(-), B=370, L=649, M=709, H=873 |  |