DMR 39723 chr10:102497501-102497650 (150bp)

DMR Stats
Positionchr10:102497501-102497650 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesPAX2 (7817bp away)
ANODEV p-value1.3374638301e-05
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39723 chr10 102496646 102498515 wgEncodeRegDnaseClusteredV2 45 score:1000, srow:165467
39723 chr10 102496597 102511574 wgEncodeRegTfbsClusteredV3 EZH2 score:1000, expCount:12, expNums:3,6,10,13,15,17,19,21,36,38,40,43, expScores:151,292,292,497,307,171,100,330,212,193,266,276, srow:588966
39723 chr10 102497081 102497696 wgEncodeRegTfbsClusteredV3 CHD1 score:557, expCount:1, expNums:4, expScores:557, srow:588968
39723 chr10 102497129 102497944 wgEncodeRegTfbsClusteredV3 CTBP2 score:448, expCount:1, expNums:348, expScores:214, srow:588969
39723 chr10 102497161 102498034 wgEncodeRegTfbsClusteredV3 RBBP5 score:202, expCount:1, expNums:8, expScores:169, srow:588970
39723 chr10 102497290 102497613 wgEncodeRegTfbsClusteredV3 SP1 score:193, expCount:1, expNums:153, expScores:193, srow:588971
39723 chr10 102497442 102497717 wgEncodeRegTfbsClusteredV3 USF2 score:205, expCount:1, expNums:360, expScores:205, srow:588972
39723 chr10 102497519 102497635 wgEncodeRegTfbsClusteredV3 USF1 score:492, expCount:1, expNums:161, expScores:492, srow:588973
39723 chr10 102497628 102498437 wgEncodeRegTfbsClusteredV3 SUZ12 score:152, expCount:1, expNums:578, expScores:152, srow:588974
39723 chr10 102497617 102497631 tfbsConsSites V$TAXCREB_01 score:775, zScore:1.67, srow:676522
39723 chr10 102497619 102497627 tfbsConsSites V$PAX2_02 score:976, zScore:1.82, srow:676523
39723 chr10 102497613 102497632 phastConsElements100way lod=63 score:404, srow:1186970
39723 chr10 102497635 102497645 phastConsElements100way lod=46 score:373, srow:1186971
39723 chr10 102497155 102497675 cpgIsland CpG: 46 length:521, cpgNum:46, gcNum:339, perCpg:17.7, perGc:65.1, obsExp:0.84, srow:3165
  • 14 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
39723 cellmeth_recounts PrEC: 0, LNCaP: 8, DU145: 4
39723 cellexp id=ENSG00000075891, name=PAX2, PrEC=0, str=0, LNCaP=20, str=6, DU145=9, str=2
39723 tcgameth site:cg09432613, B=0.03, L=0.16, H=0.11
39723 tcgaexp gene=DUX4, entrez=22947, pos=chr10:76142-191000255(+), B=0, L=0, M=0, H=0