DMR 39897 chr11:13984351-13984950 (600bp)

DMR Stats
Positionchr11:13984351-13984950 (View on UCSC)
Width600bp
Genomic Contextpromoter
Nearest GenesSPON1 (0bp away)
ANODEV p-value1.60047839915e-05
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
39897 SPON1 4393 uc001mle.3 chr11 13984184 14289679 + 600 100.0 0.65 0 55.5 E1 (56.5), I1 (43.67), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39897 chr11 13984101 13986430 wgEncodeRegDnaseClusteredV2 80 score:1000, srow:193664
39897 chr11 13983672 13986826 wgEncodeRegTfbsClusteredV3 EZH2 score:849, expCount:9, expNums:3,6,15,19,21,36,38,40,43, expScores:171,448,231,103,358,462,197,224,382, srow:668999
39897 chr11 13983757 13984566 wgEncodeRegTfbsClusteredV3 SUZ12 score:131, expCount:2, expNums:358,578, expScores:95,131, srow:669000
39897 chr11 13983924 13984835 wgEncodeRegTfbsClusteredV3 RBBP5 score:393, expCount:1, expNums:8, expScores:199, srow:669001
39897 chr11 13984055 13984455 wgEncodeRegTfbsClusteredV3 ZNF263 score:812, expCount:1, expNums:368, expScores:812, srow:669002
39897 chr11 13984060 13984523 wgEncodeRegTfbsClusteredV3 POLR2A score:249, expCount:1, expNums:78, expScores:249, srow:669003
39897 chr11 13984242 13984449 wgEncodeRegTfbsClusteredV3 CTCF score:128, expCount:2, expNums:597,635, expScores:128,123, srow:669004
39897 chr11 13984277 13984892 wgEncodeRegTfbsClusteredV3 CHD1 score:274, expCount:1, expNums:4, expScores:274, srow:669005
39897 chr11 13984601 13984833 wgEncodeRegTfbsClusteredV3 CTCF score:166, expCount:3, expNums:597,635,636, expScores:166,153,124, srow:669006
39897 chr11 13984426 13984443 tfbsConsSites V$CMYB_01 score:812, zScore:2.09, srow:799566
39897 chr11 13984461 13984478 tfbsConsSites V$AHR_01 score:784, zScore:2, srow:799567
39897 chr11 13984496 13984516 tfbsConsSites V$NRSF_01 score:798, zScore:3.16, srow:799568
39897 chr11 13984575 13984587 tfbsConsSites V$CHOP_01 score:852, zScore:2.18, srow:799569
39897 chr11 13984623 13984646 tfbsConsSites V$STAT5A_02 score:769, zScore:2.11, srow:799570
39897 chr11 13984638 13984649 tfbsConsSites V$NMYC_01 score:875, zScore:1.69, srow:799571
39897 chr11 13984525 13984525 cosmic COSM1352802 srow:192786
39897 chr11 13984617 13984617 cosmic COSM126940 srow:192787
39897 chr11 13984384 13984403 phastConsElements100way lod=19 score:285, srow:1375467
39897 chr11 13984434 13984459 phastConsElements100way lod=101 score:450, srow:1375468
39897 chr11 13984475 13984480 phastConsElements100way lod=13 score:247, srow:1375469
39897 chr11 13984494 13984540 phastConsElements100way lod=160 score:496, srow:1375470
39897 chr11 13984542 13984561 phastConsElements100way lod=161 score:496, srow:1375471
39897 chr11 13984566 13984570 phastConsElements100way lod=33 score:340, srow:1375472
39897 chr11 13984572 13984609 phastConsElements100way lod=307 score:560, srow:1375473
39897 chr11 13984612 13984642 phastConsElements100way lod=230 score:532, srow:1375474
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Omics Overlaps

Dmrid Omic Set Data Plot
39897 cellmeth_recounts PrEC: 0, LNCaP: 295, DU145: 9
39897 cellmeth_diffreps_PrECvsLNCaP A=3, B=316, Length=1260, Event=Up, log2FC=6.72, padj=0
39897 cellmeth_diffreps_LNCaPvsDU145 A=336.75, B=12.16, Length=1200, Event=Down, log2FC=-4.79, padj=0
39897 cellexp id=ENSG00000152268, name=SPON1, PrEC=18, str=146, LNCaP=2, str=5, DU145=32, str=27
39897 tcgameth site:cg02994974, B=0.08, L=0.22, H=0.21
39897 tcgaexp gene=SPON1, entrez=10418, pos=chr11:13984184-14289679(+), B=3647, L=1800, M=1356, H=1187
39897 pubmed gene=SPON1, G=46, GP=0, GC=13, GM=1, GPM=0, GCM=1