DMR 39908 chr11:20618801-20619000 (200bp)

DMR Stats
Positionchr11:20618801-20619000 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesSLC6A5 (1945bp away)
ANODEV p-value9.66512111759e-06
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
39908 chr11 20618261 20619655 wgEncodeRegDnaseClusteredV2 34 score:611, srow:197174
39908 chr11 20618318 20620211 wgEncodeRegTfbsClusteredV3 EZH2 score:486, expCount:6, expNums:6,15,21,38,40,43, expScores:348,366,317,186,220,276, srow:679099
39908 chr11 20618792 20619461 wgEncodeRegTfbsClusteredV3 RBBP5 score:197, expCount:1, expNums:8, expScores:197, srow:679101
39908 chr11 20618961 20619270 wgEncodeRegTfbsClusteredV3 SUZ12 score:147, expCount:1, expNums:358, expScores:147, srow:679102
39908 chr11 20618791 20618805 tfbsConsSites V$SPZ1_01 score:880, zScore:1.94, srow:818412
39908 chr11 20618973 20618984 tfbsConsSites V$OCT1_07 score:869, zScore:1.91, srow:818413
39908 chr11 20618974 20618986 tfbsConsSites V$OCT_C score:822, zScore:2.01, srow:818414
39908 chr11 20618969 20618972 phastConsElements100way lod=14 score:255, srow:1406593
39908 chr11 20618976 20618980 phastConsElements100way lod=19 score:285, srow:1406594
39908 chr11 20618198 20619920 cpgIsland CpG: 123 length:1723, cpgNum:123, gcNum:1017, perCpg:14.3, perGc:59, obsExp:0.83, srow:3960
  • 10 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
39908 cellmeth_recounts PrEC: 0, LNCaP: 6, DU145: 13
39908 pubmed gene=SLC6A5, G=151, GP=0, GC=3, GM=0, GPM=0, GCM=0