DMR 40132 chr12:220101-220250 (150bp)

DMR Stats
Positionchr12:220101-220250 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesIQSEC3 (0bp away)
ANODEV p-value0.00476135392658
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
40132 IQSEC3 5882 uc001qhu.1 chr12 186542 280494 + 150 100.0 0.32 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) 0.0
40132 IQSEC3 5882 uc001qhw.2 chr12 176049 287625 + 150 100.0 2.4 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
40132 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 0
40132 cellexp id=ENSG00000120645, name=IQSEC3, PrEC=1, str=4, LNCaP=5, str=2, DU145=3, str=3
40132 cellexp id=ENSG00000256948, name=RP11-598F7.3, PrEC=0, str=0, LNCaP=1, str=1, DU145=0, str=0
40132 tcgaexp gene=ZNF26, entrez=7574, pos=chr12:93510-133589154(+), B=419, L=392, M=412, H=512
40132 tcgaexp gene=ZNF84, entrez=7637, pos=chr12:42780-133639885(+), B=1626, L=1649, M=1716, H=2045
40132 tcgaexp gene=IQSEC3, entrez=440073, pos=chr12:176049-287625(+), B=193, L=82, M=63, H=58