DMR 40184 chr12:39539151-39539550 (400bp)
| DMR Stats | |
|---|---|
| Position | chr12:39539151-39539550 (View on UCSC) |
| Width | 400bp |
| Genomic Context | intergenic |
| Nearest Genes | KIF21A (147479bp away) |
| ANODEV p-value | 0.000156083732291 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 40184 | chr12 | 39538986 | 39539490 | wgEncodeRegDnaseClusteredV2 | 58 | score:935, srow:265524 |
| 40184 | chr12 | 39539501 | 39539675 | wgEncodeRegDnaseClusteredV2 | 3 | score:150, srow:265525 |
| 40184 | chr12 | 39538504 | 39539787 | wgEncodeRegTfbsClusteredV3 | EZH2 | score:602, expCount:2, expNums:21,38, expScores:333,186, srow:909607 |
| 40184 | chr12 | 39539169 | 39539598 | wgEncodeRegTfbsClusteredV3 | CTCF | score:1000, expCount:64, expNums:2,5,14,16,18,20,35,37,39,42,44,48,49,137,174,290,463,595,597,598,601,603,605,606,607,609,618,630,635,636,638,639,641,642,643,644,648,650,651,652,653,654,655,656,657,658,659,660,661,662,663,664,665,668,669,671,672,673,675,676,678,683,685,686, expScores:128,550,291,424,273,494,246,175,430,188,593,607,635,397,170,495,116,1000,624,270,314,612,1000,576,516,472,237,192,1000,343,781,161,415,759,246,704,161,131,128,378,1000,599,357,345,1000,794,698,310,1000,616,152,873,608,114,606,938,722,1000,708,1000,484,418,705,960, srow:909608 |
| 40184 | chr12 | 39539238 | 39539533 | wgEncodeRegTfbsClusteredV3 | FOXP2 | score:155, expCount:1, expNums:255, expScores:155, srow:909609 |
| 40184 | chr12 | 39539246 | 39539535 | wgEncodeRegTfbsClusteredV3 | ZNF143 | score:176, expCount:1, expNums:361, expScores:176, srow:909610 |
| 40184 | chr12 | 39539260 | 39539506 | wgEncodeRegTfbsClusteredV3 | RAD21 | score:623, expCount:4, expNums:149,193,280,355, expScores:623,150,202,325, srow:909611 |
| 40184 | chr12 | 39538384 | 39539500 | cpgIsland | CpG: 115 | length:1117, cpgNum:115, gcNum:761, perCpg:20.6, perGc:68.1, obsExp:0.89, srow:5224 |
| 40184 | chr12 | 39539501 | 39541500 | cpgShore | — | values(x.gr)[overs$srow, ]:9612 |
- 9 featuress
