DMR 4022 chr7:63506051-63506200 (150bp)
| DMR Stats | |
|---|---|
| Position | chr7:63506051-63506200 (View on UCSC) |
| Width | 150bp |
| Genomic Context | promoter |
| Nearest Genes | ZNF727 (0bp away) |
| ANODEV p-value | 0.0143942753342 |
| Frequencies | Benign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4022 | ZNF727 | 27085 | uc011kdm.2 | chr7 | 63505821 | 63538927 | + | 150 | 100.0 | 0.08 | 0 | 100.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 4022 | chr7 | 63505981 | 63506150 | wgEncodeRegDnaseClusteredV2 | 4 | score:661, srow:1096738 |
| 4022 | chr7 | 63505978 | 63506298 | cpgIsland | CpG: 23 | length:321, cpgNum:23, gcNum:189, perCpg:14.3, perGc:58.9, obsExp:0.83, srow:24404 |
- 2 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 4022 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 0 |  |
| 4022 | cellexp | id=ENSG00000214652, name=RP11-3N2.13, PrEC=2, str=0, LNCaP=0, str=0, DU145=0, str=0 |  |
| 4022 | cellexp | id=ENSG00000257482, name=ZNF727, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0 |  |
| 4022 | tcgaexp | gene=ZNF727, entrez=442319, pos=chr7:63505821-63538927(+), B=50, L=24, M=36, H=23 |  |