DMR 4030 chr7:65823551-65823700 (150bp)
| DMR Stats | |
|---|---|
| Position | chr7:65823551-65823700 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | TPST1 (0bp away) |
| ANODEV p-value | 0.021257510054 |
| Frequencies | Benign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 3.0 (33.33 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4030 | TPST1 | 27120 | uc003tuw.3 | chr7 | 65670259 | 65825438 | + | 150 | 100.0 | 0.07 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0) | 0.0 |
| 4030 | TPST1 | 27120 | uc010kzy.2 | chr7 | 65670259 | 65824460 | + | 150 | 100.0 | 0.21 | 1 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0) | 100.0 |
- 2 geness
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 4030 | cellmeth_recounts | PrEC: 9, LNCaP: 0, DU145: 0 |  |
| 4030 | cellmeth_diffreps_PrECvsLNCaP | A=14, B=0, Length=360, Event=Down, log2FC=-Inf, padj=0.000432533284720616 |  |
| 4030 | cellmeth_diffreps_PrECvsDU145 | A=14, B=0, Length=360, Event=Down, log2FC=-Inf, padj=0.000506195974236337 |  |
| 4030 | cellexp | id=ENSG00000169902, name=TPST1, PrEC=2018, str=9553, LNCaP=557, str=927, DU145=1278, str=1520 |  |
| 4030 | tcgaexp | gene=TPST1, entrez=8460, pos=chr7:65670259-65825438(+), B=894, L=670, M=669, H=708 |  |