DMR 40678 chr14:105199751-105199900 (150bp)
| DMR Stats | |
|---|---|
| Position | chr14:105199751-105199900 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | ADSSL1 (0bp away) |
| ANODEV p-value | 0.0224780079895 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40678 | ADSSL1 | 8885 | uc001ypd.3 | chr14 | 105190534 | 105213647 | + | 150 | 100.0 | 0.63 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) | 0.0 |
| 40678 | ADSSL1 | 8885 | uc001ype.3 | chr14 | 105196228 | 105213647 | + | 150 | 100.0 | 0.63 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) | 0.0 |
| 40678 | ADSSL1 | 8885 | uc001ypf.3 | chr14 | 105196228 | 105213647 | + | 150 | 100.0 | 0.9 | 1 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) | 0.0 |
- 3 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 40678 | chr14 | 105199377 | 105199920 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:214, expCount:1, expNums:613, expScores:214, srow:1297069 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 40678 | cellmeth_recounts | PrEC: 25, LNCaP: 20, DU145: 1 |  |
| 40678 | cellmeth_diffreps_PrECvsDU145 | A=38, B=1, Length=400, Event=Down, log2FC=-5.25, padj=2.56051906907383e-09 |  |
| 40678 | cellmeth_diffreps_LNCaPvsDU145 | A=17.1, B=0.94, Length=300, Event=Down, log2FC=-4.19, padj=0.00311648242974852 |  |
| 40678 | cellexp | id=ENSG00000185100, name=ADSSL1, PrEC=76, str=275, LNCaP=739, str=483, DU145=861, str=610 |  |
| 40678 | tcgaexp | gene=ADSSL1, entrez=122622, pos=chr14:105190534-105213647(+), B=491, L=376, M=374, H=361 |  |