DMR 40981 chr16:11028301-11028450 (150bp)
| DMR Stats | |
|---|---|
| Position | chr16:11028301-11028450 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | DEXI (0bp away) |
| ANODEV p-value | 0.0318543044816 |
| Frequencies | Benign: 1.0 (14.29%), Low: 2.0 (33.33%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40981 | DEXI | 10943 | uc002dal.3 | chr16 | 11022748 | 11036257 | - | 150 | 100.0 | 0.41 | 0 | 0.0 | E1 (0), I1 (100), E2 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 40981 | chr16 | 11028164 | 11029083 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:420, expCount:5, expNums:104,123,124,308,602, expScores:420,393,407,344,149, srow:1469921 |
| 40981 | chr16 | 11028285 | 11028600 | wgEncodeRegTfbsClusteredV3 | JUN | score:140, expCount:2, expNums:428,458, expScores:139,140, srow:1469922 |
| 40981 | chr16 | 11028310 | 11028753 | wgEncodeRegTfbsClusteredV3 | GATA2 | score:135, expCount:1, expNums:459, expScores:135, srow:1469923 |
| 40981 | chr16 | 11028319 | 11028594 | wgEncodeRegTfbsClusteredV3 | JUND | score:400, expCount:1, expNums:435, expScores:400, srow:1469924 |
| 40981 | chr16 | 11028314 | 11028332 | tfbsConsSites | V$ER_Q6 | score:821, zScore:2.44, srow:1897080 |
| 40981 | chr16 | 11028381 | 11028391 | tfbsConsSites | V$SREBP1_02 | score:819, zScore:1.79, srow:1897081 |
| 40981 | chr16 | 11028448 | 11028449 | phastConsElements100way | lod=13 | score:247, srow:3259923 |
- 7 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 40981 | cellmeth_recounts | PrEC: 25, LNCaP: 9, DU145: 1 |  |
| 40981 | cellmeth_diffreps_PrECvsLNCaP | A=38, B=7, Length=360, Event=Down, log2FC=-2.44, padj=6.21305417223257e-05 |  |
| 40981 | cellmeth_diffreps_PrECvsDU145 | A=38, B=1, Length=380, Event=Down, log2FC=-5.25, padj=2.56051906907383e-09 |  |
| 40981 | cellexp | id=ENSG00000182108, name=DEXI, PrEC=1, str=7, LNCaP=4, str=8, DU145=1, str=3 |  |
| 40981 | tcgaexp | gene=DEXI, entrez=28955, pos=chr16:11022748-11036257(-), B=2168, L=2214, M=1990, H=1671 |  |